eF-site ID 5j61-F
PDB Code 5j61
Chain F

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Title D-aminoacyl-tRNA deacylase (DTD) from Plasmodium falciparum in complex with glycyl-3'-aminoadenosine at 2.10 Angstrom resolution
Classification HYDROLASE
Compound D-tyrosyl-tRNA(Tyr) deacylase
Source Plasmodium falciparum (isolate 3D7) (Q8IIS0_PLAF7)
Sequence F:  MRVVIQRVKGAILSVRKELEIISEIKNGLICFLGIHKNDT
WEDALYIIRKCLNLRLWNNDNKTWDKNVKDLNYELLIVSQ
FTLFGNTKKGNKPDFHLAKEPNEALIFYNKIIDEFKKQYN
DDKIKIGKFGNYMNIDVTNDGPVTIYIDTHDI
Description


Functional site

1) chain F
residue 150
type
sequence P
description binding site for residue A3G E 501
source : AC5

2) chain F
residue 41
type
sequence L
description binding site for residue A3G F 501
source : AC6

3) chain F
residue 43
type
sequence I
description binding site for residue A3G F 501
source : AC6

4) chain F
residue 87
type
sequence S
description binding site for residue A3G F 501
source : AC6

5) chain F
residue 88
type
sequence Q
description binding site for residue A3G F 501
source : AC6

6) chain F
residue 89
type
sequence F
description binding site for residue A3G F 501
source : AC6

7) chain F
residue 107
type
sequence K
description binding site for residue A3G F 501
source : AC6

8) chain F
residue 109
type
sequence P
description binding site for residue A3G F 501
source : AC6

9) chain F
residue 112
type
sequence A
description binding site for residue A3G F 501
source : AC6

10) chain F
residue 137
type
sequence F
description binding site for residue A3G F 501
source : AC6

11) chain F
residue 138
type
sequence G
description binding site for residue A3G F 501
source : AC6

12) chain F
residue 72
type BINDING
sequence W
description BINDING => ECO:0000305|PubMed:20007323, ECO:0007744|PDB:3KO5
source Swiss-Prot : SWS_FT_FI2

13) chain F
residue 89
type BINDING
sequence F
description BINDING => ECO:0000305|PubMed:20007323, ECO:0007744|PDB:3KO4, ECO:0007744|PDB:3KO5
source Swiss-Prot : SWS_FT_FI3

14) chain F
residue 90
type ACT_SITE
sequence T
description Nucleophile => ECO:0000305|PubMed:20007323
source Swiss-Prot : SWS_FT_FI1


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