eF-site ID 5j61-C
PDB Code 5j61
Chain C

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Title D-aminoacyl-tRNA deacylase (DTD) from Plasmodium falciparum in complex with glycyl-3'-aminoadenosine at 2.10 Angstrom resolution
Classification HYDROLASE
Compound D-tyrosyl-tRNA(Tyr) deacylase
Source Plasmodium falciparum (isolate 3D7) (Q8IIS0_PLAF7)
Sequence C:  MRVVIQRVKGAILSVRKELEIISEIKNGLICFLGIHKNDT
WEDALYIIRKCLNLRLWNNDNKTWDKNVKDLNYELLIVSQ
FTLFGNTKKGNKPDFHLAKEPNEALIFYNKIIDEFKKQYN
DDKIKIGKFGNYMNIDVTNDGPVTIYIDTHDIN
Description


Functional site

1) chain C
residue 41
type
sequence L
description binding site for residue A3G C 501
source : AC3

2) chain C
residue 43
type
sequence I
description binding site for residue A3G C 501
source : AC3

3) chain C
residue 87
type
sequence S
description binding site for residue A3G C 501
source : AC3

4) chain C
residue 88
type
sequence Q
description binding site for residue A3G C 501
source : AC3

5) chain C
residue 89
type
sequence F
description binding site for residue A3G C 501
source : AC3

6) chain C
residue 107
type
sequence K
description binding site for residue A3G C 501
source : AC3

7) chain C
residue 137
type
sequence F
description binding site for residue A3G C 501
source : AC3

8) chain C
residue 138
type
sequence G
description binding site for residue A3G C 501
source : AC3

9) chain C
residue 150
type
sequence P
description binding site for residue A3G D 501
source : AC4

10) chain C
residue 108
type
sequence E
description binding site for residue A3G E 501
source : AC5

11) chain C
residue 110
type
sequence N
description binding site for residue A3G E 501
source : AC5

12) chain C
residue 72
type BINDING
sequence W
description BINDING => ECO:0000305|PubMed:20007323, ECO:0007744|PDB:3KO5
source Swiss-Prot : SWS_FT_FI2

13) chain C
residue 89
type BINDING
sequence F
description BINDING => ECO:0000305|PubMed:20007323, ECO:0007744|PDB:3KO4, ECO:0007744|PDB:3KO5
source Swiss-Prot : SWS_FT_FI3

14) chain C
residue 90
type ACT_SITE
sequence T
description Nucleophile => ECO:0000305|PubMed:20007323
source Swiss-Prot : SWS_FT_FI1


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