eF-site ID 5j61-ABCDEFGH PDB Code 5j61 Chain A, B, C, D, E, F, G, H click to enlarge Title D-aminoacyl-tRNA deacylase (DTD) from Plasmodium falciparum in complex with glycyl-3'-aminoadenosine at 2.10 Angstrom resolution Classification HYDROLASE Compound D-tyrosyl-tRNA(Tyr) deacylase Source Plasmodium falciparum (isolate 3D7) (Q8IIS0_PLAF7) Sequence A:  MRVVIQRVKGAILSVRKLEIISEIKNGLICFLGIHKNDTW EDALYIIRKCLNLRLWNNDNKTWDKNVKDLNYELLIVSQF TLFGNTKKGNKPDFHLAKEPNEALIFYNKIIDEFKKQYND DKIKIGKFGNYMNIDVTNDGPVTIYIDTHDI B:  MRVVIQRVKGAILSVRKLEIISEIKNGLICFLGIHKNDTW EDALYIIRKCLNLRLWNNDNKTWDKNVKDLNYELLIVSQF TLFGNTKKGNKPDFHLAKEPNEALIFYNKIIDEFKKQYND DKIKIGKFGNYMNIDVTNDGPVTIYIDTHDIN C:  MRVVIQRVKGAILSVRKELEIISEIKNGLICFLGIHKNDT WEDALYIIRKCLNLRLWNNDNKTWDKNVKDLNYELLIVSQ FTLFGNTKKGNKPDFHLAKEPNEALIFYNKIIDEFKKQYN DDKIKIGKFGNYMNIDVTNDGPVTIYIDTHDIN D:  MRVVIQRVKGAILSVRKELEIISEIKNGLICFLGIHKNDT WEDALYIIRKCLNLRLWNNDNKTWDKNVKDLNYELLIVSQ FTLFGNTKKGNKPDFHLAKEPNEALIFYNKIIDEFKKQYN DDKIKIGKFGNYMNIDVTNDGPVTIYIDTHDI E:  MRVVIQRVKGAILSVRKENEIISEIKNGLICFLGIHKNDT WEDALYIIRKCLNLRLWNNDNKTWDKNVKDLNYELLIVSQ FTLFGNTKKGNKPDFHLAKEPNEALIFYNKIIDEFKKQYN DDKIKIGKFGNYMNIDVTNDGPVTIYIDTHDI F:  MRVVIQRVKGAILSVRKELEIISEIKNGLICFLGIHKNDT WEDALYIIRKCLNLRLWNNDNKTWDKNVKDLNYELLIVSQ FTLFGNTKKGNKPDFHLAKEPNEALIFYNKIIDEFKKQYN DDKIKIGKFGNYMNIDVTNDGPVTIYIDTHDI G:  MRVVIQRVKGAILSVRELEIISEIKNGLICFLGIHKNDTW EDALYIIRKCLNLRLWNNDNKTWDKNVKDLNYELLIVSQF TLFGNTKKGNKPDFHLAKEPNEALIFYNKIIDEFKKQYND DKIKIGKFGNYMNIDVTNDGPVTIYIDTHDIN H:  MRVVIQRVKGAILSVRKLEIISEIKNGLICFLGIHKNDTW EDALYIIRKCLNLRLWNNDNKTWDKNVKDLNYELLIVSQF TLFGNTKKGNKPDFHLAKEPNEALIFYNKIIDEFKKQYND DKIKIGKFGNYMNIDVTNDGPVTIYIDTHD Description Functional site 1) chain A residue 41 type sequence L description binding site for residue A3G A 501 source : AC1 2) chain A residue 43 type sequence I description binding site for residue A3G A 501 source : AC1 3) chain A residue 87 type sequence S description binding site for residue A3G A 501 source : AC1 4) chain A residue 88 type sequence Q description binding site for residue A3G A 501 source : AC1 5) chain A residue 89 type sequence F description binding site for residue A3G A 501 source : AC1 6) chain A residue 107 type sequence K description binding site for residue A3G A 501 source : AC1 7) chain A residue 137 type sequence F description binding site for residue A3G A 501 source : AC1 8) chain A residue 138 type sequence G description binding site for residue A3G A 501 source : AC1 9) chain B residue 150 type sequence P description binding site for residue A3G A 501 source : AC1 10) chain A residue 149 type sequence G description binding site for residue A3G B 501 source : AC2 11) chain A residue 150 type sequence P description binding site for residue A3G B 501 source : AC2 12) chain B residue 41 type sequence L description binding site for residue A3G B 501 source : AC2 13) chain B residue 43 type sequence I description binding site for residue A3G B 501 source : AC2 14) chain B residue 87 type sequence S description binding site for residue A3G B 501 source : AC2 15) chain B residue 88 type sequence Q description binding site for residue A3G B 501 source : AC2 16) chain B residue 89 type sequence F description binding site for residue A3G B 501 source : AC2 17) chain B residue 107 type sequence K description binding site for residue A3G B 501 source : AC2 18) chain B residue 137 type sequence F description binding site for residue A3G B 501 source : AC2 19) chain B residue 138 type sequence G description binding site for residue A3G B 501 source : AC2 20) chain C residue 41 type sequence L description binding site for residue A3G C 501 source : AC3 21) chain C residue 43 type sequence I description binding site for residue A3G C 501 source : AC3 22) chain C residue 87 type sequence S description binding site for residue A3G C 501 source : AC3 23) chain C residue 88 type sequence Q description binding site for residue A3G C 501 source : AC3 24) chain C residue 89 type sequence F description binding site for residue A3G C 501 source : AC3 25) chain C residue 107 type sequence K description binding site for residue A3G C 501 source : AC3 26) chain C residue 137 type sequence F description binding site for residue A3G C 501 source : AC3 27) chain C residue 138 type sequence G description binding site for residue A3G C 501 source : AC3 28) chain D residue 149 type sequence G description binding site for residue A3G C 501 source : AC3 29) chain D residue 150 type sequence P description binding site for residue A3G C 501 source : AC3 30) chain C residue 150 type sequence P description binding site for residue A3G D 501 source : AC4 31) chain D residue 41 type sequence L description binding site for residue A3G D 501 source : AC4 32) chain D residue 43 type sequence I description binding site for residue A3G D 501 source : AC4 33) chain D residue 87 type sequence S description binding site for residue A3G D 501 source : AC4 34) chain D residue 88 type sequence Q description binding site for residue A3G D 501 source : AC4 35) chain D residue 89 type sequence F description binding site for residue A3G D 501 source : AC4 36) chain D residue 107 type sequence K description binding site for residue A3G D 501 source : AC4 37) chain D residue 137 type sequence F description binding site for residue A3G D 501 source : AC4 38) chain D residue 138 type sequence G description binding site for residue A3G D 501 source : AC4 39) chain C residue 108 type sequence E description binding site for residue A3G E 501 source : AC5 40) chain C residue 110 type sequence N description binding site for residue A3G E 501 source : AC5 41) chain E residue 41 type sequence L description binding site for residue A3G E 501 source : AC5 42) chain E residue 43 type sequence I description binding site for residue A3G E 501 source : AC5 43) chain E residue 87 type sequence S description binding site for residue A3G E 501 source : AC5 44) chain E residue 88 type sequence Q description binding site for residue A3G E 501 source : AC5 45) chain E residue 89 type sequence F description binding site for residue A3G E 501 source : AC5 46) chain E residue 107 type sequence K description binding site for residue A3G E 501 source : AC5 47) chain E residue 137 type sequence F description binding site for residue A3G E 501 source : AC5 48) chain E residue 138 type sequence G description binding site for residue A3G E 501 source : AC5 49) chain F residue 150 type sequence P description binding site for residue A3G E 501 source : AC5 50) chain E residue 150 type sequence P description binding site for residue A3G F 501 source : AC6 51) chain F residue 41 type sequence L description binding site for residue A3G F 501 source : AC6 52) chain F residue 43 type sequence I description binding site for residue A3G F 501 source : AC6 53) chain F residue 87 type sequence S description binding site for residue A3G F 501 source : AC6 54) chain F residue 88 type sequence Q description binding site for residue A3G F 501 source : AC6 55) chain F residue 89 type sequence F description binding site for residue A3G F 501 source : AC6 56) chain F residue 107 type sequence K description binding site for residue A3G F 501 source : AC6 57) chain F residue 109 type sequence P description binding site for residue A3G F 501 source : AC6 58) chain F residue 112 type sequence A description binding site for residue A3G F 501 source : AC6 59) chain F residue 137 type sequence F description binding site for residue A3G F 501 source : AC6 60) chain F residue 138 type sequence G description binding site for residue A3G F 501 source : AC6 61) chain G residue 41 type sequence L description binding site for residue A3G G 501 source : AC7 62) chain G residue 43 type sequence I description binding site for residue A3G G 501 source : AC7 63) chain G residue 87 type sequence S description binding site for residue A3G G 501 source : AC7 64) chain G residue 88 type sequence Q description binding site for residue A3G G 501 source : AC7 65) chain G residue 89 type sequence F description binding site for residue A3G G 501 source : AC7 66) chain G residue 107 type sequence K description binding site for residue A3G G 501 source : AC7 67) chain G residue 137 type sequence F description binding site for residue A3G G 501 source : AC7 68) chain G residue 138 type sequence G description binding site for residue A3G G 501 source : AC7 69) chain H residue 150 type sequence P description binding site for residue A3G G 501 source : AC7 70) chain G residue 150 type sequence P description binding site for residue A3G H 501 source : AC8 71) chain H residue 41 type sequence L description binding site for residue A3G H 501 source : AC8 72) chain H residue 43 type sequence I description binding site for residue A3G H 501 source : AC8 73) chain H residue 87 type sequence S description binding site for residue A3G H 501 source : AC8 74) chain H residue 88 type sequence Q description binding site for residue A3G H 501 source : AC8 75) chain H residue 89 type sequence F description binding site for residue A3G H 501 source : AC8 76) chain H residue 107 type sequence K description binding site for residue A3G H 501 source : AC8 77) chain H residue 137 type sequence F description binding site for residue A3G H 501 source : AC8 78) chain H residue 138 type sequence G description binding site for residue A3G H 501 source : AC8 79) chain A residue 90 type ACT_SITE sequence T description Nucleophile => ECO:0000305|PubMed:20007323 source Swiss-Prot : SWS_FT_FI1 80) chain B residue 90 type ACT_SITE sequence T description Nucleophile => ECO:0000305|PubMed:20007323 source Swiss-Prot : SWS_FT_FI1 81) chain C residue 90 type ACT_SITE sequence T description Nucleophile => ECO:0000305|PubMed:20007323 source Swiss-Prot : SWS_FT_FI1 82) chain D residue 90 type ACT_SITE sequence T description Nucleophile => ECO:0000305|PubMed:20007323 source Swiss-Prot : SWS_FT_FI1 83) chain E residue 90 type ACT_SITE sequence T description Nucleophile => ECO:0000305|PubMed:20007323 source Swiss-Prot : SWS_FT_FI1 84) chain F residue 90 type ACT_SITE sequence T description Nucleophile => ECO:0000305|PubMed:20007323 source Swiss-Prot : SWS_FT_FI1 85) chain G residue 90 type ACT_SITE sequence T description Nucleophile => ECO:0000305|PubMed:20007323 source Swiss-Prot : SWS_FT_FI1 86) chain H residue 90 type ACT_SITE sequence T description Nucleophile => ECO:0000305|PubMed:20007323 source Swiss-Prot : SWS_FT_FI1 87) chain A residue 72 type BINDING sequence W description BINDING => ECO:0000305|PubMed:20007323, ECO:0007744|PDB:3KO5 source Swiss-Prot : SWS_FT_FI2 88) chain B residue 72 type BINDING sequence W description BINDING => ECO:0000305|PubMed:20007323, ECO:0007744|PDB:3KO5 source Swiss-Prot : SWS_FT_FI2 89) chain C residue 72 type BINDING sequence W description BINDING => ECO:0000305|PubMed:20007323, ECO:0007744|PDB:3KO5 source Swiss-Prot : SWS_FT_FI2 90) chain D residue 72 type BINDING sequence W description BINDING => ECO:0000305|PubMed:20007323, ECO:0007744|PDB:3KO5 source Swiss-Prot : SWS_FT_FI2 91) chain E residue 72 type BINDING sequence W description BINDING => ECO:0000305|PubMed:20007323, ECO:0007744|PDB:3KO5 source Swiss-Prot : SWS_FT_FI2 92) chain F residue 72 type BINDING sequence W description BINDING => ECO:0000305|PubMed:20007323, ECO:0007744|PDB:3KO5 source Swiss-Prot : SWS_FT_FI2 93) chain G residue 72 type BINDING sequence W description BINDING => ECO:0000305|PubMed:20007323, ECO:0007744|PDB:3KO5 source Swiss-Prot : SWS_FT_FI2 94) chain H residue 72 type BINDING sequence W description BINDING => ECO:0000305|PubMed:20007323, ECO:0007744|PDB:3KO5 source Swiss-Prot : SWS_FT_FI2 95) chain A residue 89 type BINDING sequence F description BINDING => ECO:0000305|PubMed:20007323, ECO:0007744|PDB:3KO4, ECO:0007744|PDB:3KO5 source Swiss-Prot : SWS_FT_FI3 96) chain B residue 89 type BINDING sequence F description BINDING => ECO:0000305|PubMed:20007323, ECO:0007744|PDB:3KO4, ECO:0007744|PDB:3KO5 source Swiss-Prot : SWS_FT_FI3 97) chain C residue 89 type BINDING sequence F description BINDING => ECO:0000305|PubMed:20007323, ECO:0007744|PDB:3KO4, ECO:0007744|PDB:3KO5 source Swiss-Prot : SWS_FT_FI3 98) chain D residue 89 type BINDING sequence F description BINDING => ECO:0000305|PubMed:20007323, ECO:0007744|PDB:3KO4, ECO:0007744|PDB:3KO5 source Swiss-Prot : SWS_FT_FI3 99) chain E residue 89 type BINDING sequence F description BINDING => ECO:0000305|PubMed:20007323, ECO:0007744|PDB:3KO4, ECO:0007744|PDB:3KO5 source Swiss-Prot : SWS_FT_FI3 100) chain F residue 89 type BINDING sequence F description BINDING => ECO:0000305|PubMed:20007323, ECO:0007744|PDB:3KO4, ECO:0007744|PDB:3KO5 source Swiss-Prot : SWS_FT_FI3 101) chain G residue 89 type BINDING sequence F description BINDING => ECO:0000305|PubMed:20007323, ECO:0007744|PDB:3KO4, ECO:0007744|PDB:3KO5 source Swiss-Prot : SWS_FT_FI3 102) chain H residue 89 type BINDING sequence F description BINDING => ECO:0000305|PubMed:20007323, ECO:0007744|PDB:3KO4, ECO:0007744|PDB:3KO5 source Swiss-Prot : SWS_FT_FI3

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