eF-site ID 5j61-A
PDB Code 5j61
Chain A

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Title D-aminoacyl-tRNA deacylase (DTD) from Plasmodium falciparum in complex with glycyl-3'-aminoadenosine at 2.10 Angstrom resolution
Classification HYDROLASE
Compound D-tyrosyl-tRNA(Tyr) deacylase
Source Plasmodium falciparum (isolate 3D7) (Q8IIS0_PLAF7)
Sequence A:  MRVVIQRVKGAILSVRKLEIISEIKNGLICFLGIHKNDTW
EDALYIIRKCLNLRLWNNDNKTWDKNVKDLNYELLIVSQF
TLFGNTKKGNKPDFHLAKEPNEALIFYNKIIDEFKKQYND
DKIKIGKFGNYMNIDVTNDGPVTIYIDTHDI
Description


Functional site

1) chain A
residue 41
type
sequence L
description binding site for residue A3G A 501
source : AC1

2) chain A
residue 43
type
sequence I
description binding site for residue A3G A 501
source : AC1

3) chain A
residue 87
type
sequence S
description binding site for residue A3G A 501
source : AC1

4) chain A
residue 88
type
sequence Q
description binding site for residue A3G A 501
source : AC1

5) chain A
residue 89
type
sequence F
description binding site for residue A3G A 501
source : AC1

6) chain A
residue 107
type
sequence K
description binding site for residue A3G A 501
source : AC1

7) chain A
residue 137
type
sequence F
description binding site for residue A3G A 501
source : AC1

8) chain A
residue 138
type
sequence G
description binding site for residue A3G A 501
source : AC1

9) chain A
residue 149
type
sequence G
description binding site for residue A3G B 501
source : AC2

10) chain A
residue 150
type
sequence P
description binding site for residue A3G B 501
source : AC2

11) chain A
residue 90
type ACT_SITE
sequence T
description Nucleophile => ECO:0000305|PubMed:20007323
source Swiss-Prot : SWS_FT_FI1

12) chain A
residue 72
type BINDING
sequence W
description BINDING => ECO:0000305|PubMed:20007323, ECO:0007744|PDB:3KO5
source Swiss-Prot : SWS_FT_FI2

13) chain A
residue 89
type BINDING
sequence F
description BINDING => ECO:0000305|PubMed:20007323, ECO:0007744|PDB:3KO4, ECO:0007744|PDB:3KO5
source Swiss-Prot : SWS_FT_FI3


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