eF-site ID 5j37-ABCDE
PDB Code 5j37
Chain A, B, C, D, E

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Title Crystal structure of 60-mer BFDV Capsid Protein in complex with single stranded DNA
Classification VIRUS/DNA
Compound Beak and feather disease virus capsid protein
Source Beak and feather disease virus (BFDV) (5J37)
Sequence A:  FSTNRIYTLRLTRQFQFKINKQTTSVGNLIFNADYITFAL
DDFLQAVPNPHTLNFEDYRIKLAKMEMRPTGGHYTVQSDG
FGHTAVIQDSRITRFKTTADQTQDPLAPFDGAKKWFVSRG
FKRLLRPKPQITIEDLTTANQSAALWLNSARTGWIPLQGG
PNSAGTKVRHYGIAFSFPQPEQTITYVTKLTLYVQFRQFA
PNNPST
B:  FSTNRIYTLRLTRQFQFKINKQTTSVGNLIFNADYITFAL
DDFLQAVPNPHTLNFEDYRIKLAKMEMRPTGGHYTVQSDG
FGHTAVIQDSRITRFKTTADQTQDPLAPFDGAKKWFVSRG
FKRLLRPKPQITIEDLTTANQSAALWLNSARTGWIPLQGG
PNSAGTKVRHYGIAFSFPQPEQTITYVTKLTLYVQFRQFA
PNNPST
C:  FSTNRIYTLRLTRQFQFKINKQTTSVGNLIFNADYITFAL
DDFLQAVPNPHTLNFEDYRIKLAKMEMRPTGGHYTVQSDG
FGHTAVIQDSRITRFKTTADQTQDPLAPFDGAKKWFVSRG
FKRLLRPKPQITIEDLTTANQSAALWLNSARTGWIPLQGG
PNSAGTKVRHYGIAFSFPQPEQTITYVTKLTLYVQFRQFA
PNNPST
D:  FSTNRIYTLRLTRQFQFKINKQTTSVGNLIFNADYITFAL
DDFLQAVPNPHTLNFEDYRIKLAKMEMRPTGGHYTVQSDG
FGHTAVIQDSRITRFKTTADQTQDPLAPFDGAKKWFVSRG
FKRLLRPKPQITIEDLTTANQSAALWLNSARTGWIPLQGG
PNSAGTKVRHYGIAFSFPQPEQTITYVTKLTLYVQFRQFA
PNNPST
E:  FSTNRIYTLRLTRQFQFKINKQTTSVGNLIFNADYITFAL
DDFLQAVPNPHTLNFEDYRIKLAKMEMRPTGGHYTVQSDG
FGHTAVIQDSRITRFKTTADQTQDPLAPFDGAKKWFVSRG
FKRLLRPKPQITIEDLTTANQSAALWLNSARTGWIPLQGG
PNSAGTKVRHYGIAFSFPQPEQTITYVTKLTLYVQFRQFA
PNNPST
Description


Functional site

1) chain C
residue 152
type
sequence G
description binding site for residue PO4 E 301
source : AC1

2) chain C
residue 154
type
sequence K
description binding site for residue PO4 E 301
source : AC1

3) chain C
residue 164
type
sequence R
description binding site for residue PO4 E 301
source : AC1

4) chain E
residue 43
type
sequence S
description binding site for residue PO4 E 301
source : AC1

5) chain E
residue 44
type
sequence T
description binding site for residue PO4 E 301
source : AC1

6) chain A
residue 43
type
sequence S
description binding site for residue PO4 A 301
source : AC2

7) chain A
residue 44
type
sequence T
description binding site for residue PO4 A 301
source : AC2

8) chain A
residue 154
type
sequence K
description binding site for residue PO4 A 301
source : AC2

9) chain A
residue 164
type
sequence R
description binding site for residue PO4 A 301
source : AC2

10) chain B
residue 43
type
sequence S
description binding site for residue PO4 B 301
source : AC3

11) chain B
residue 44
type
sequence T
description binding site for residue PO4 B 301
source : AC3

12) chain E
residue 154
type
sequence K
description binding site for residue PO4 B 301
source : AC3

13) chain E
residue 164
type
sequence R
description binding site for residue PO4 B 301
source : AC3

14) chain B
residue 152
type
sequence G
description binding site for residue PO4 C 301
source : AC4

15) chain B
residue 154
type
sequence K
description binding site for residue PO4 C 301
source : AC4

16) chain B
residue 164
type
sequence R
description binding site for residue PO4 C 301
source : AC4

17) chain C
residue 43
type
sequence S
description binding site for residue PO4 C 301
source : AC4

18) chain C
residue 44
type
sequence T
description binding site for residue PO4 C 301
source : AC4

19) chain D
residue 43
type
sequence S
description binding site for residue PO4 D 301
source : AC5

20) chain D
residue 44
type
sequence T
description binding site for residue PO4 D 301
source : AC5

21) chain D
residue 152
type
sequence G
description binding site for residue PO4 D 301
source : AC5

22) chain D
residue 154
type
sequence K
description binding site for residue PO4 D 301
source : AC5

23) chain D
residue 164
type
sequence R
description binding site for residue PO4 D 301
source : AC5


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