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eF-site ID
|
5iz7-C |
PDB Code
|
5iz7 |
Chain
|
C |
|
click to enlarge
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Title
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Cryo-EM structure of thermally stable Zika virus strain H/PF/2013 |
Classification
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VIRUS |
Compound
|
structural protein E |
Source
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ORGANISM_COMMON: ZIKV; ORGANISM_SCIENTIFIC: Zika virus; |
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Sequence
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C: |
IRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVTVMAQDKPT
VDIELVTTTVSNMAEVRSYCYEASISDMASDSRCPTQGEA
YLDKQSDTQYVCKRTLVDRGWGNGCGLFGKGSLVTCAKFA
CSKKMTGKSIQPENLEYRIMLSVHGSQHSGMIVNDTGHET
DENRAKVEITPNSPRAEATLGGFGSLGLDCEPRTGLDFSD
LYYLTMNNKHWLVHKEWFHDIPLPWHAGADTGTPHWNNKE
ALVEFKDAHAKRQTVVVLGSQEGAVHTALAGALEAEMDGA
KGRLSSGHLKCRLKMDKLRLKGVSYSLCTAAFTFTKIPAE
TLHGTVTVEVQYAGTDGPCKVPAQMAVDMQTLTPVGRLIT
ANPVITESTENSKMMLELDPPFGDSYIVIGVGEKKITHHW
HRSGSTIGKAFEATVRGAKRMAVLGDTAWDFGSVGGALNS
LGKGIHQIFGAAFKSLFGGMSWFSQILIGTLLMWLGLNTK
NGSISLMCLALGGVLIFLSTAVSA
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Description
|
(1) |
structural protein E, structural protein M
|
|
Functional site
|
|
1)
|
chain |
C |
residue |
484-504 |
type |
TOPO_DOM |
sequence |
ISLMCLALGGVLIFLSTAVSA
|
description |
Cytoplasmic => ECO:0000305
|
source |
Swiss-Prot : SWS_FT_FI2
|
|
2)
|
chain |
C |
residue |
154 |
type |
CARBOHYD |
sequence |
N
|
description |
N-linked (GlcNAc...) asparagine; by host => ECO:0000269|PubMed:27093288, ECO:0000269|PubMed:27338953, ECO:0000269|PubMed:27882950, ECO:0000269|PubMed:29091758
|
source |
Swiss-Prot : SWS_FT_FI5
|
|
3)
|
chain |
C |
residue |
38 |
type |
CROSSLNK |
sequence |
K
|
description |
Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:A0A142I5B9
|
source |
Swiss-Prot : SWS_FT_FI6
|
|
4)
|
chain |
C |
residue |
281 |
type |
CROSSLNK |
sequence |
K
|
description |
Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:A0A142I5B9
|
source |
Swiss-Prot : SWS_FT_FI6
|
|
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