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eF-site ID
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5iz7-A |
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PDB Code
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5iz7 |
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Chain
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A |
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click to enlarge
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Title
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Cryo-EM structure of thermally stable Zika virus strain H/PF/2013 |
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Classification
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VIRUS |
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Compound
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structural protein E |
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Source
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ORGANISM_COMMON: ZIKV; ORGANISM_SCIENTIFIC: Zika virus; |
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Sequence
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A: |
IRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVTVMAQDKPT
VDIELVTTTVSNMAEVRSYCYEASISDMASDSRCPTQGEA
YLDKQSDTQYVCKRTLVDRGWGNGCGLFGKGSLVTCAKFA
CSKKMTGKSIQPENLEYRIMLSVHGSQHSGMIVNDTGHET
DENRAKVEITPNSPRAEATLGGFGSLGLDCEPRTGLDFSD
LYYLTMNNKHWLVHKEWFHDIPLPWHAGADTGTPHWNNKE
ALVEFKDAHAKRQTVVVLGSQEGAVHTALAGALEAEMDGA
KGRLSSGHLKCRLKMDKLRLKGVSYSLCTAAFTFTKIPAE
TLHGTVTVEVQYAGTDGPCKVPAQMAVDMQTLTPVGRLIT
ANPVITESTENSKMMLELDPPFGDSYIVIGVGEKKITHHW
HRSGSTIGKAFEATVRGAKRMAVLGDTAWDFGSVGGALNS
LGKGIHQIFGAAFKSLFGGMSWFSQILIGTLLMWLGLNTK
NGSISLMCLALGGVLIFLSTAVSA
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Description
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(1) |
structural protein E, structural protein M
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Functional site
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|
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1)
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chain |
A |
| residue |
154 |
| type |
CARBOHYD |
| sequence |
N
|
| description |
N-linked (GlcNAc...) asparagine; by host => ECO:0000269|PubMed:27093288, ECO:0000269|PubMed:27338953, ECO:0000269|PubMed:27882950, ECO:0000269|PubMed:29091758
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| source |
Swiss-Prot : SWS_FT_FI5
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2)
|
chain |
A |
| residue |
38 |
| type |
CROSSLNK |
| sequence |
K
|
| description |
Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:A0A142I5B9
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| source |
Swiss-Prot : SWS_FT_FI6
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3)
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chain |
A |
| residue |
281 |
| type |
CROSSLNK |
| sequence |
K
|
| description |
Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:A0A142I5B9
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| source |
Swiss-Prot : SWS_FT_FI6
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