eF-site ID 5irx-A
PDB Code 5irx
Chain A

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Title Structure of TRPV1 in complex with DkTx and RTX, determined in lipid nanodisc
Classification TRANSPORT PROTEIN
Compound Transient receptor potential cation channel subfamily V member 1
Source (DKTX_HAPSC)
Sequence A:  TPLALAASSGKIGVLAYILQREIHEPECRHLSRKFTEWAY
GPVHSSLYDLSCIDTCEKNSVLEVIAYSSSETPNRHDMLL
VEPLNRLLQDKWDRFVKRIFYFNFFVYCLYMIIFTAAAYY
RPVEGLPPYKLKNTVGDYFRVTGEILSVSGGVYFFFRGIQ
YFLQRRPSLKSLFVDSYSEILFFVQSLFMLVSVVLYFSQR
KEYVASMVFSLAMGWTNMLYYTRGFQQMGIYAVMIEKMIL
RDLCRFMFVYLVFLFGFSTAVVTLIEDGKYNSLYSTCLEL
FKFTIGMGDLEFTENYDFKAVFIILLLAYVILTYILLLNM
LIALMGETVNKIAQESKNIWKLQRAITILDTEKSFLKCMR
KAFRSGKLLQVGFTPDGKDDYRWCFRVDEVNWTT
Description (1)  Transient receptor potential cation channel subfamily V member 1, Tau-theraphotoxin-Hs1a


Functional site

1) chain A
residue 437
type
sequence N
description binding site for residue 6O8 A 801
source : AC1

2) chain A
residue 440
type
sequence V
description binding site for residue 6O8 A 801
source : AC1

3) chain A
residue 487
type
sequence Y
description binding site for residue 6O8 A 801
source : AC1

4) chain A
residue 488
type
sequence F
description binding site for residue 6O8 A 801
source : AC1

5) chain A
residue 491
type
sequence R
description binding site for residue 6O8 A 801
source : AC1

6) chain A
residue 513
type
sequence E
description binding site for residue 6O8 A 801
source : AC1

7) chain A
residue 516
type
sequence F
description binding site for residue 6O8 A 801
source : AC1

8) chain A
residue 554
type
sequence Y
description binding site for residue 6O8 A 801
source : AC1

9) chain A
residue 555
type
sequence Y
description binding site for residue 6O8 A 801
source : AC1

10) chain A
residue 629
type
sequence S
description binding site for residue 6OE A 802
source : AC2

11) chain A
residue 631
type
sequence Y
description binding site for residue 6OE A 802
source : AC2

12) chain A
residue 532
type
sequence S
description binding site for residue 6OE A 803
source : AC3

13) chain A
residue 534
type
sequence R
description binding site for residue 6OE A 803
source : AC3

14) chain A
residue 511
type
sequence Y
description binding site for residue 6EU A 804
source : AC4

15) chain A
residue 512
type
sequence S
description binding site for residue 6EU A 804
source : AC4

16) chain A
residue 514
type
sequence I
description binding site for residue 6EU A 804
source : AC4

17) chain A
residue 515
type
sequence L
description binding site for residue 6EU A 804
source : AC4

18) chain A
residue 546
type
sequence A
description binding site for residue 6EU A 804
source : AC4

19) chain A
residue 547
type
sequence M
description binding site for residue 6EU A 804
source : AC4

20) chain A
residue 550
type
sequence T
description binding site for residue 6EU A 804
source : AC4

21) chain A
residue 551
type
sequence N
description binding site for residue 6EU A 804
source : AC4

22) chain A
residue 553
type
sequence L
description binding site for residue 6EU A 804
source : AC4

23) chain A
residue 554
type
sequence Y
description binding site for residue 6EU A 804
source : AC4

24) chain A
residue 557
type
sequence R
description binding site for residue 6EU A 804
source : AC4

25) chain A
residue 566
type
sequence A
description binding site for residue 6EU A 804
source : AC4

26) chain A
residue 569
type
sequence I
description binding site for residue 6EU A 804
source : AC4

27) chain A
residue 573
type
sequence I
description binding site for residue 6EU A 804
source : AC4

28) chain A
residue 591
type
sequence F
description binding site for residue 6EU C 803
source : AD1

29) chain A
residue 668
type
sequence I
description binding site for residue 6EU C 803
source : AD1

30) chain A
residue 669
type
sequence L
description binding site for residue 6EU C 803
source : AD1

31) chain A
residue 534
type
sequence R
description binding site for residue 6O9 F 102
source : AE1

32) chain A
residue 453
type
sequence Y
description binding site for residue 6OE F 103
source : AE2

33) chain A
residue 600-649
type SITE
sequence EDGKYNSLYSTCLELFKFTIGMGDLEF
description Important residue for activation of TRPV1 => ECO:0000305|PubMed:26880553
source Swiss-Prot : SWS_FT_FI2

34) chain A
residue 650-672
type INTRAMEM
sequence TENYDFKAVFIILLLAYVILTYI
description Pore-forming => ECO:0000269|PubMed:24305160, ECO:0000269|PubMed:27281200, ECO:0000305|PubMed:10931826
source Swiss-Prot : SWS_FT_FI4

35) chain A
residue 370
type MOD_RES
sequence T
description Phosphothreonine; by PKA; in vitro => ECO:0000269|PubMed:12194871
source Swiss-Prot : SWS_FT_FI10

36) chain A
residue 502
type MOD_RES
sequence S
description Phosphoserine; by PKC/PRKCE => ECO:0000269|PubMed:11884385, ECO:0000269|PubMed:12194871, ECO:0000269|PubMed:14630912
source Swiss-Prot : SWS_FT_FI11

37) chain A
residue 727
type MOD_RES
sequence Q
description Phosphothreonine => ECO:0000269|PubMed:14630912
source Swiss-Prot : SWS_FT_FI12

38) chain A
residue 627
type CARBOHYD
sequence Y
description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:11683872
source Swiss-Prot : SWS_FT_FI13

39) chain A
residue 511
type BINDING
sequence Y
description BINDING => ECO:0000269|PubMed:27281200, ECO:0007744|PDB:5IRX
source Swiss-Prot : SWS_FT_FI7

40) chain A
residue 550
type BINDING
sequence T
description BINDING => ECO:0000269|PubMed:27281200, ECO:0007744|PDB:5IRX
source Swiss-Prot : SWS_FT_FI7

41) chain A
residue 557
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:27281200, ECO:0007744|PDB:5IRX
source Swiss-Prot : SWS_FT_FI7

42) chain A
residue 669
type BINDING
sequence L
description BINDING => ECO:0000250|UniProtKB:Q9R186
source Swiss-Prot : SWS_FT_FI8


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