eF-site ID 5ieh-ABC PDB Code 5ieh Chain A, B, C click to enlarge Title Structure of HLA-B*40:02 in complex with the phosphorylated endogenous peptide REF(p)SKEPEL Classification IMMUNE SYSTEM Compound HLA class I histocompatibility antigen, B-40 alpha chain Source (E9PM67_HUMAN) Sequence A:  GSHSMRYFHTSVSRPGRGEPRFITVGYVDDTLFVRFDSDA TSPAKEPRAPWIEQEGPEYWDRETQISKTNTQTYRESLRN LRGYYNQSEAGSHTLQSMYGCDVGPDGRLLRGHNQYAYDG KDYIALNEDLRSWTAADTAAQITQRKWEAARVAEQLRAYL EGECVEWLRRYLENGKETLQRADPPKTHVTHHPISDHEAT LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRT FQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP B:  QRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLK NGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACR VNHVTLSQPKIVKWDRDM C:  REFXKEPEL Description (1)  HLA class I histocompatibility antigen, B-40 alpha chain, Beta-2-microglobulin, Inner centromere protein Functional site 1) chain A residue 206 type sequence L description binding site for residue EDO B 101 source : AC1 2) chain A residue 234 type sequence R description binding site for residue EDO B 101 source : AC1 3) chain A residue 242 type sequence Q description binding site for residue EDO B 101 source : AC1 4) chain B residue 10 type sequence Y description binding site for residue EDO B 101 source : AC1 5) chain B residue 11 type sequence S description binding site for residue EDO B 101 source : AC1 6) chain B residue 13 type sequence H description binding site for residue EDO B 101 source : AC1 7) chain B residue 14 type sequence P description binding site for residue EDO B 101 source : AC1 8) chain A residue 257-263 type prosite sequence YTCHVQH description IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YTCHVQH source prosite : PS00290 9) chain B residue 78-84 type prosite sequence YACRVNH description IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YTCHVQH source prosite : PS00290 10) chain B residue 2 type MOD_RES sequence Q description Pyrrolidone carboxylic acid; in form pI 5.3 => ECO:0000269|PubMed:7554280 source Swiss-Prot : SWS_FT_FI1 11) chain A residue 84 type MOD_RES sequence Y description Pyrrolidone carboxylic acid; in form pI 5.3 => ECO:0000269|PubMed:7554280 source Swiss-Prot : SWS_FT_FI1 12) chain A residue 143 type MOD_RES sequence T description Pyrrolidone carboxylic acid; in form pI 5.3 => ECO:0000269|PubMed:7554280 source Swiss-Prot : SWS_FT_FI1 13) chain A residue 146 type MOD_RES sequence K description Pyrrolidone carboxylic acid; in form pI 5.3 => ECO:0000269|PubMed:7554280 source Swiss-Prot : SWS_FT_FI1 14) chain A residue 152 type MOD_RES sequence V description Pyrrolidone carboxylic acid; in form pI 5.3 => ECO:0000269|PubMed:7554280 source Swiss-Prot : SWS_FT_FI1 15) chain A residue 159 type MOD_RES sequence Y description Pyrrolidone carboxylic acid; in form pI 5.3 => ECO:0000269|PubMed:7554280 source Swiss-Prot : SWS_FT_FI1 16) chain A residue 171 type MOD_RES sequence Y description Pyrrolidone carboxylic acid; in form pI 5.3 => ECO:0000269|PubMed:7554280 source Swiss-Prot : SWS_FT_FI1 17) chain B residue 19 type CARBOHYD sequence K description N-linked (Glc) (glycation) lysine; in vitro => ECO:0000269|PubMed:7918443 source Swiss-Prot : SWS_FT_FI3 18) chain B residue 41 type CARBOHYD sequence K description N-linked (Glc) (glycation) lysine; in vitro => ECO:0000269|PubMed:7918443 source Swiss-Prot : SWS_FT_FI3 19) chain B residue 48 type CARBOHYD sequence K description N-linked (Glc) (glycation) lysine; in vitro => ECO:0000269|PubMed:7918443 source Swiss-Prot : SWS_FT_FI3 20) chain B residue 58 type CARBOHYD sequence K description N-linked (Glc) (glycation) lysine; in vitro => ECO:0000269|PubMed:7918443 source Swiss-Prot : SWS_FT_FI3 21) chain B residue 91 type CARBOHYD sequence K description N-linked (Glc) (glycation) lysine; in vitro => ECO:0000269|PubMed:7918443 source Swiss-Prot : SWS_FT_FI3 22) chain B residue 94 type CARBOHYD sequence K description N-linked (Glc) (glycation) lysine; in vitro => ECO:0000269|PubMed:7918443 source Swiss-Prot : SWS_FT_FI3

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