eF-site ID 5idn-A
PDB Code 5idn
Chain A

click to enlarge
Title CDK8-CYCC IN COMPLEX WITH [(S)-2-(4-Chloro-phenyl)-pyrrolidin-1-yl]-(3-methyl-1H-pyrazolo[3,4-b]pyridin-5-yl)-methanone
Classification TRANSFERASE
Compound Cyclin-dependent kinase 8
Source Homo sapiens (Human) (CCNC_HUMAN)
Sequence A:  MDYDFKVKLSSERERVEDLFEYEGCKVGRGTYGHVYKAKR
KDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVIS
LQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANLPR
GMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPE
RGRVKIADMGFARVTFWYRAPELLLGARHYTKAIDIWAIG
CIFAELLTSEPIFHCRQNPYHHDQLDRIFNVMGFPADKDW
EDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSK
AFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPLPTSDVFA
GCQIPYPKREFLTEEE
Description


Functional site

1) chain A
residue 27
type
sequence V
description binding site for residue 6A7 A 401
source : AC1

2) chain A
residue 28
type
sequence G
description binding site for residue 6A7 A 401
source : AC1

3) chain A
residue 32
type
sequence Y
description binding site for residue 6A7 A 401
source : AC1

4) chain A
residue 50
type
sequence A
description binding site for residue 6A7 A 401
source : AC1

5) chain A
residue 52
type
sequence K
description binding site for residue 6A7 A 401
source : AC1

6) chain A
residue 79
type
sequence I
description binding site for residue 6A7 A 401
source : AC1

7) chain A
residue 97
type
sequence F
description binding site for residue 6A7 A 401
source : AC1

8) chain A
residue 98
type
sequence D
description binding site for residue 6A7 A 401
source : AC1

9) chain A
residue 99
type
sequence Y
description binding site for residue 6A7 A 401
source : AC1

10) chain A
residue 100
type
sequence A
description binding site for residue 6A7 A 401
source : AC1

11) chain A
residue 155
type
sequence A
description binding site for residue 6A7 A 401
source : AC1

12) chain A
residue 158
type
sequence L
description binding site for residue 6A7 A 401
source : AC1

13) chain A
residue 173
type
sequence D
description binding site for residue 6A7 A 401
source : AC1

14) chain A
residue 356
type
sequence R
description binding site for residue 6A7 A 401
source : AC1

15) chain A
residue 125
type
sequence R
description binding site for residue EDO A 402
source : AC2

16) chain A
residue 302
type
sequence V
description binding site for residue EDO A 402
source : AC2

17) chain A
residue 303
type
sequence K
description binding site for residue EDO A 402
source : AC2

18) chain A
residue 149
type
sequence H
description binding site for residue FMT A 403
source : AC3

19) chain A
residue 151
type
sequence D
description binding site for residue FMT A 403
source : AC3

20) chain A
residue 173
type
sequence D
description binding site for residue FMT A 403
source : AC3

21) chain A
residue 176
type
sequence F
description binding site for residue FMT A 403
source : AC3

22) chain A
residue 32
type
sequence Y
description binding site for residue FMT A 404
source : AC4

23) chain A
residue 52
type
sequence K
description binding site for residue FMT A 404
source : AC4

24) chain A
residue 62
type
sequence S
description binding site for residue FMT A 404
source : AC4

25) chain A
residue 63
type
sequence A
description binding site for residue FMT A 404
source : AC4

26) chain A
residue 17
type
sequence E
description binding site for residue FMT A 405
source : AC5

27) chain A
residue 22
type
sequence Y
description binding site for residue FMT A 405
source : AC5

28) chain A
residue 87
type
sequence S
description binding site for residue FMT A 405
source : AC5

29) chain A
residue 90
type
sequence D
description binding site for residue FMT A 405
source : AC5

30) chain A
residue 94
type
sequence W
description binding site for residue FMT A 405
source : AC5

31) chain A
residue 151
type ACT_SITE
sequence D
description Proton acceptor => ECO:0000255|PROSITE-ProRule:PRU00159, ECO:0000255|PROSITE-ProRule:PRU10027
source Swiss-Prot : SWS_FT_FI1

32) chain A
residue 27
type BINDING
sequence V
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00159
source Swiss-Prot : SWS_FT_FI2

33) chain A
residue 52
type BINDING
sequence K
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00159
source Swiss-Prot : SWS_FT_FI2

34) chain A
residue 27-52
type prosite
sequence VGRGTYGHVYKAKRKDGKDDKDYALK
description PROTEIN_KINASE_ATP Protein kinases ATP-binding region signature. VGRGTYGHVYkAkrkdgkddkd........YALK
source prosite : PS00107

35) chain A
residue 147-159
type prosite
sequence VLHRDLKPANILV
description PROTEIN_KINASE_ST Serine/Threonine protein kinases active-site signature. VlHrDLKpaNILV
source prosite : PS00108


Display surface

Download
Links