eF-site ID 5icn-ABC
PDB Code 5icn
Chain A, B, C

click to enlarge
Title HDAC1:MTA1 in complex with inositol-6-phosphate and a novel peptide inhibitor based on histone H4
Classification TRANSCRIPTION
Compound Metastasis-associated protein MTA1
Source (5ICN)
Sequence A:  GEIRVGNRYQADITDLLKEGEEDGRDQSRLETQVWEAHNP
LTDKQIDQFLVVARSVGTFARALDSLHMSAAAASRDITLF
HAMDTLHKNIYDISKAISALVPQGGPVLCRDEMEEWSASE
ANLFEEALEKYGKDFTDIQQDFLPWKSLTSIIEYYYMWKT
TDRYVQQK
B:  RRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGL
YRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEY
SKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQ
QTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH
QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPG
TGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSK
VMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEF
VKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNE
LPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLF
ENLRMLPHA
C:  GAXRH
Description


Functional site

1) chain A
residue 305
type
sequence K
description binding site for residue IHP A 401
source : AC1

2) chain A
residue 327
type
sequence Y
description binding site for residue IHP A 401
source : AC1

3) chain A
residue 328
type
sequence Y
description binding site for residue IHP A 401
source : AC1

4) chain A
residue 331
type
sequence K
description binding site for residue IHP A 401
source : AC1

5) chain B
residue 27
type
sequence G
description binding site for residue IHP A 401
source : AC1

6) chain B
residue 31
type
sequence K
description binding site for residue IHP A 401
source : AC1

7) chain B
residue 270
type
sequence R
description binding site for residue IHP A 401
source : AC1

8) chain B
residue 305
type
sequence I
description binding site for residue IHP A 401
source : AC1

9) chain B
residue 176
type
sequence D
description binding site for residue ZN B 401
source : AC2

10) chain B
residue 178
type
sequence H
description binding site for residue ZN B 401
source : AC2

11) chain B
residue 264
type
sequence D
description binding site for residue ZN B 401
source : AC2

12) chain C
residue 16
type
sequence X
description binding site for residue ZN B 401
source : AC2

13) chain B
residue 174
type
sequence D
description binding site for residue K B 402
source : AC3

14) chain B
residue 176
type
sequence D
description binding site for residue K B 402
source : AC3

15) chain B
residue 178
type
sequence H
description binding site for residue K B 402
source : AC3

16) chain B
residue 197
type
sequence S
description binding site for residue K B 402
source : AC3

17) chain B
residue 198
type
sequence F
description binding site for residue K B 402
source : AC3

18) chain B
residue 187
type
sequence F
description binding site for residue K B 403
source : AC4

19) chain B
residue 190
type
sequence T
description binding site for residue K B 403
source : AC4

20) chain B
residue 193
type
sequence V
description binding site for residue K B 403
source : AC4

21) chain B
residue 222
type
sequence Y
description binding site for residue K B 403
source : AC4

22) chain B
residue 74
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate => ECO:0000250|UniProtKB:Q92769
source Swiss-Prot : SWS_FT_FI5

23) chain B
residue 141
type ACT_SITE
sequence H
description ACT_SITE => ECO:0000269|PubMed:19182791, ECO:0000269|PubMed:28497810
source Swiss-Prot : SWS_FT_FI1

24) chain B
residue 74
type MOD_RES
sequence K
description N6-acetyllysine; alternate => ECO:0007744|PubMed:19608861
source Swiss-Prot : SWS_FT_FI2

25) chain B
residue 220
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0007744|PubMed:19608861
source Swiss-Prot : SWS_FT_FI3

26) chain B
residue 261
type MOD_RES
sequence C
description S-nitrosocysteine => ECO:0000250|UniProtKB:P70288
source Swiss-Prot : SWS_FT_FI4

27) chain B
residue 273
type MOD_RES
sequence C
description S-nitrosocysteine => ECO:0000250|UniProtKB:P70288
source Swiss-Prot : SWS_FT_FI4


Display surface

Download
Links