eF-site ID 5hji-A
PDB Code 5hji
Chain A

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Title Crystal Structure of Pyrococcus abyssi Trm5a complexed with adenosine
Classification TRANSFERASE
Compound tRNA (guanine(37)-N1)-methyltransferase Trm5a
Source Pyrococcus abyssi (strain GE5 / Orsay) (TRM5A_PYRAB)
Sequence A:  SHHHHHHLEVLFQGPHMSGVKVRREDAKKVLELLKSVGIL
DGKRKAIRDEKYVIFPVTDTNIAKSLGLEVVDVELPMRPE
RQIYKNLEDLLPREIFKKLGRLDIVGDIAIVSIPDEILSE
REVIVSAIRKLYPKVKVIARRGFHSGLYRIRELEVIWGEN
RLHTIHKENGVLIKVDLSKVFFNPRMKGERYRIAQLVNDG
ERILVPFAGVIPYPLVIARFKNVEVYAVEINEFAVKLAEE
NLELNRDRLKGKIKIIHGDVFEVLPNLPNFDRVVSPTPKG
VDALSLTLSKAEKFLHYYDFVHESEIERFRERVLEECRRQ
GKECRVSVRKVSDYKPHVYKVCADVEILS
Description


Functional site

1) chain A
residue 131
type
sequence L
description binding site for residue ADN A 401
source : AC1

2) chain A
residue 132
type
sequence Y
description binding site for residue ADN A 401
source : AC1

3) chain A
residue 133
type
sequence R
description binding site for residue ADN A 401
source : AC1

4) chain A
residue 165
type
sequence F
description binding site for residue ADN A 401
source : AC1

5) chain A
residue 191
type
sequence F
description binding site for residue ADN A 401
source : AC1

6) chain A
residue 213
type
sequence E
description binding site for residue ADN A 401
source : AC1

7) chain A
residue 214
type
sequence I
description binding site for residue ADN A 401
source : AC1

8) chain A
residue 242
type
sequence G
description binding site for residue ADN A 401
source : AC1

9) chain A
residue 243
type
sequence D
description binding site for residue ADN A 401
source : AC1

10) chain A
residue 244
type
sequence V
description binding site for residue ADN A 401
source : AC1

11) chain A
residue 245
type
sequence F
description binding site for residue ADN A 401
source : AC1

12) chain A
residue 262
type
sequence P
description binding site for residue ADN A 401
source : AC1

13) chain A
residue 191
type BINDING
sequence F
description BINDING => ECO:0000305|PubMed:27852927
source Swiss-Prot : SWS_FT_FI2

14) chain A
residue 174
type BINDING
sequence R
description BINDING => ECO:0000255|PROSITE-ProRule:PRU01021, ECO:0000305|PubMed:27852927
source Swiss-Prot : SWS_FT_FI1

15) chain A
residue 213
type BINDING
sequence E
description BINDING => ECO:0000255|PROSITE-ProRule:PRU01021, ECO:0000305|PubMed:27852927
source Swiss-Prot : SWS_FT_FI1

16) chain A
residue 243
type BINDING
sequence D
description BINDING => ECO:0000255|PROSITE-ProRule:PRU01021, ECO:0000305|PubMed:27852927
source Swiss-Prot : SWS_FT_FI1


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