eF-site ID 5hbj-A
PDB Code 5hbj
Chain A

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Title CDK8-CYCC IN COMPLEX WITH 8-[2-Amino-3-chloro-5-(1-methyl-1H-indazol-5-yl)-pyridin-4-yl]-2,8-diaza-spiro[4.5]decan-1-one
Classification TRANSFERASE
Compound Cyclin-dependent kinase 8
Source null (CCNC_HUMAN)
Sequence A:  DKMDYDFKVKLSSERERVEDLFEYEGCKVGRGTYGHVYKA
KRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNV
ISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKAVQ
LPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGE
GPERGRVKIADMGFLFNSPLVTFWYRAPELLLGARHYTKA
IDIWAIGCIFAELLTSEPIFHCRQSNPYHHDQLDRIFNVM
GFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEK
HKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDP
LPTSDVFAGCQIPYPKREFLTE
Description (1)  Cyclin-dependent kinase 8 (E.C.2.7.11.22,2.7.11.23), Cyclin-C


Functional site

1) chain A
residue 27
type
sequence V
description binding site for residue 5Y8 A 401
source : AC1

2) chain A
residue 32
type
sequence Y
description binding site for residue 5Y8 A 401
source : AC1

3) chain A
residue 35
type
sequence V
description binding site for residue 5Y8 A 401
source : AC1

4) chain A
residue 50
type
sequence A
description binding site for residue 5Y8 A 401
source : AC1

5) chain A
residue 52
type
sequence K
description binding site for residue 5Y8 A 401
source : AC1

6) chain A
residue 79
type
sequence I
description binding site for residue 5Y8 A 401
source : AC1

7) chain A
residue 98
type
sequence D
description binding site for residue 5Y8 A 401
source : AC1

8) chain A
residue 100
type
sequence A
description binding site for residue 5Y8 A 401
source : AC1

9) chain A
residue 103
type
sequence D
description binding site for residue 5Y8 A 401
source : AC1

10) chain A
residue 158
type
sequence L
description binding site for residue 5Y8 A 401
source : AC1

11) chain A
residue 172
type
sequence A
description binding site for residue 5Y8 A 401
source : AC1

12) chain A
residue 173
type
sequence D
description binding site for residue 5Y8 A 401
source : AC1

13) chain A
residue 356
type
sequence R
description binding site for residue 5Y8 A 401
source : AC1

14) chain A
residue 124
type
sequence P
description binding site for residue EDO A 402
source : AC2

15) chain A
residue 126
type
sequence G
description binding site for residue EDO A 402
source : AC2

16) chain A
residue 27-52
type prosite
sequence VGRGTYGHVYKAKRKDGKDDKDYALK
description PROTEIN_KINASE_ATP Protein kinases ATP-binding region signature. VGRGTYGHVYkAkrkdgkddkd........YALK
source prosite : PS00107

17) chain A
residue 147-159
type prosite
sequence VLHRDLKPANILV
description PROTEIN_KINASE_ST Serine/Threonine protein kinases active-site signature. VlHrDLKpaNILV
source prosite : PS00108

18) chain A
residue 151
type ACT_SITE
sequence D
description Proton acceptor => ECO:0000255|PROSITE-ProRule:PRU00159, ECO:0000255|PROSITE-ProRule:PRU10027
source Swiss-Prot : SWS_FT_FI1

19) chain A
residue 52
type BINDING
sequence K
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00159
source Swiss-Prot : SWS_FT_FI2

20) chain A
residue 27
type BINDING
sequence V
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00159
source Swiss-Prot : SWS_FT_FI2


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