Title
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Structural snapshot of cytoplasmic pre-60S ribosomal particles bound with Nmd3, Lsg1, Tif6 and Reh1 |
Classification
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RIBOSOME |
Compound
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25S ribosomal RNA |
Source
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ORGANISM_COMMON: Baker's yeast; ORGANISM_SCIENTIFIC: Saccharomyces cerevisiae; |
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Sequence
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A: |
GRVIRNQRKGAGSIFTSHTRLRQGAAKLRTLDYAERHGYI
RGIVKQIVHDSGRGAPLAKVVFRDPYKYRLREEIFIANEG
VHTGQFIYAGKKASLNVGNVLPLGSVPEGTIVSNVEEKPG
DRGALARASGNYVIIIGHNPDENKTRVRLPSGAKKVISSD
ARGVIGVIAGGGRVDKPLLKAGRAFHKYRLKRNSWPKTRG
VAMNPVDHPHGGGNHQHIGKASTISRGAVSGQKAGLIAAR
RTGLLR
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B: |
SHRKYEAPRHGHLGFLPRKRAASIRARVKAFPKDDRSKPV
ALTSFLGYKAGMTTIVRDLDRPGSKFHKREVVEAVTVVDT
PPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKN
WYKSKKKAFTKYSAKYAQDGAGIERELARIKKYASVVRVL
VHTQIRKTPLAQKKAHLAEIQLNGGSISEKVDWAREHFEK
TVAVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKLPRK
THRGLRKVACIGAWHPAHVMWSVARAGQRGYHSRTSINHK
IYRVGKGDDEANGATSFDRTKKTITPMGGFVHYGEIKNDF
IMVKGCIPGNRKRIVTLRKSLYTNTSRKALEEVSLKWIDT
ASKFGKGRFQTPAEKHAFMGTLKKDL
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C: |
SRPQVTVHSLTGEATANALPLPAVFSAPIRPDIVHTVFTS
VNKNKRQAYAVSEKAGHQTSAESWGTGRAVARIPRVGGGG
TGRSGQGAFGNMCRGGRMFAPTKTWRKWNVKVNHNEKRYA
TASAIAATAVASLVLARGHRVEKIPEIPLVVSTDLESIQK
TKEAVAALKAVGAHSDLLKVLKSKKLRAGKGKYRNRRWTQ
RRGPLVVYAEDNGIVKALRNVPGVETANVASLNLLQLAPG
AHLGRFVIWTEAAFTKLDQVWGSETVASSKVGYTLPSHII
STSDVTRIINSSEIQSAIRPAGQATQKRTHVLKKNPLKNK
QVLLRLNPYAKVFAAEKLGSKKAEKTGTKPAAVFTETLKH
D
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D: |
AFQKDAKSSAYSSRFQTPFRRRREGKTDYYQRKRLVTQHK
AKYNTPKYRLVVRFTNKDIICQIISSTITGDVVLAAAYSH
ELPRYGITHGLTNWAAAYATGLLIARRTLQKLGLDETYKG
VEEVEGEYELTEAVEDGPRPFKVFLDIGLQRTTTGARVFG
ALKGASDGGLYVPHSENRFPGWDFETEEIDPELLRSYIFG
GHVSQYMEELADDDEERFSELFKGYLADDIDADSLEDIYT
SAHEAIRADPAFKPTEKKFTKEQYAAESKKYRQTKLSKEE
RAARVAAKIAALAGQQ
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E: |
SAQKAPKWYPSEDVAALKKTRKAARPQKLRASLVPGTVLI
LLAGRFRGKRVVYLKHLEDNTLLISGPFKVNGVPLRRVNA
RYVIATSTKVSVEGVNVEKFNVEYFAKEEIKAERVEDQKV
VDKALIAEIKKTPLLKQYLSASFSLKNGDKPHMLKF
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F: |
AEQVAAERAARKAANKEKRAIILERNAAYQKEYETAERNI
IQAKRDAKAAGSYYVEAQHKLVFVVRIKGINKIPPKPRKV
LQLLRLTRINSGTFVKVTKATLELLKLIEPYVAYGYPSYS
TIRQLVYKRGFGKINKQRVPLSDNAIIEANLGKYGILSID
DLIHEIITVGPHFKQANNFLWPFKLSNPSGGWGVPRKFKH
FIQGGSFGNREEFINKLVKSMN
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G: |
NPLTHSTPKNFGIGQAVQPKRNLSRYVKWPEYVRVQRQKK
ILSIRLKVPPTIAQFQYTLDRNTAAETFKLFNKYRPETAA
EKKERLTKEAAAVAEGKSKQDASPKPYAVKYGLNHVVALI
ENKKAKLVLIANDVDPIELVVFLPALCKKMGVPYAIVKGK
ARLGTLVNQKTSAVAALTEVRAEDEAALAKLVSTIDANFA
DKYDEVKKHWGGGILGNKAQAKMDKRAKNSDSA
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H: |
MKYIQTEQQIEVPEGVTVSIKSRIVKVVGPRGTLTKNLKH
IDVTFTKVNNQLIKVAVHNGGRKHVAALRTVKSLVDNMIT
GVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGD
KKIRNVPVRDGVTIEFSTNVKDEIVLSGNSVEDVSQNAAD
LQQICRVRNKDIRKFLDGIYVSHKGFITEDL
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J: |
QNPMRDLKIEKLVLNISVGESGDRLTRASKVLEQLSGQTP
VQSKARYTVRTFGIRRNEKIAVHVTVRGPKAEEILERGLK
VKEYQLRDRNFSATGNFGFGIDEHIDLGIKYDPSIGIFGM
DFYVVMNRPGARVTRRKRCKGTVGNSHKTTKEDTVSWFKQ
KYDADVLDK
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L: |
AISKNLPILKNHFRKHWQERVKVHFDQAGKKVSRRNARAT
RAAKIAPRPLDLLRPVVRAPTVKYNRKVRAGRGFTLAEVK
AAGLTAAYARTIGIAVDHRRQNRNQEIFDANVQRLKEYQS
KIIVFPRNGKAPEAEQVLSAAATFPIAQPATDVEARAVQD
NGESAFRTLRLARSEKKFRGIREKRAREKAEAE
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M: |
TDSIVKASNWRLVEVGRVVLIKKGQSAGKLAAIVEIIDQK
KVLIDGPKAGVPRQAINLGQVVLTPLTFALPRGARTATVS
KKWAAAAVCEKWAASSWAKKIAQRERRAALTDFERFQVMV
LRKQKRYTVKKALAKA
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N: |
GAYKYLEELQRKKQSDVLRFLQRVRVWEYRQKNVIHRAAR
PTRPDKARRLGYKAKQGFVIYRVRVRRGNRKRPVPKGATY
GKPTNQGVNELKYQRSLRATAEERVGRRAANLRVLNSYWV
NQDSTYKYFEVILVDPQHKAIRRDARYNWICDPVHKHREA
RGLTATGKKSRGINKGHKFNNTKAGRRKTWKRQNTLSLWR
YRK
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O: |
VEPVVVIDGKGHLVGRLASVVAKQLLNGQKIVVVRAEELN
ISGEFFRNKLKYHDFLRKATAFNKTRGPFHFRAPSRIFYK
ALRGMVSHKTARGKAALERLKVFEGIPPPYDKKKRVVVPQ
ALRVLRLKPGRKYTTLGKLSTSVGWKYEDVVAKLEAKRKV
SSAEYYAKKRAFTKKVASANATAAESDVAKQLAALGY
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P: |
ARYGATSTNPAKSASARGSYLRVSFKNTRETAQAINGWEL
TKAQKYLEQVLDHQRAIPFRRFNSSIGRTAQGKEFGVTKA
RWPAKSVKFVQGLLQNAAANAEAKGLDATKLYVSHIQVNQ
APKQRRRTYRAHGRINKYESSPSHIELVVTEKEEAVAKAA
EKKVVRLTSRQRGRIAAQKRIAA
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Q: |
GIDHTSKQHKRSGHRTAPKSDNVYLKLLVKLYTFLARRTD
APFNKVVLKALFLSKINRPPVSVSRIARALKQEGAANKTV
VVVGTVTDDARIFEFPKTTVAALRFTAGARAKIVKAGGEC
ITLDQLAVRAPKGQNTLILRGPRNSREAVRHFGMGPHKGK
APRILSTGRKFERARGRRRSKGFKV
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R: |
ANLRTQKRLAASVVGVGKRKVWLDPNETSEIAQANSRNAI
RKLVKNGTIVKKAVTVHSKSRTRAHAQSKREGRHSGYGKR
KGTREARLPSQVVWIRRLRVLRRLLAKYRDAGKIDKHLYH
VLYKESKGNAFKHKRALVEHIIQAKADAQREKALNE
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S: |
MAHFKEYQVIGRRLPTESVPEPKLFRMRIFASNEVIAKSR
YWYFLQKLHKVKKASGEIVSINQINEAHPTKVKNFGVWVR
YDSRSGTHNMYKEIRDVSRVAAVETLYQDMAARHRARFRS
IHILKVAEIEKTADVKRQYVKQFLTKDLKFPLPHRVQKST
KTFSYKRPSTFY
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T: |
GKSHGYRSRTRYMFQRDFRKHGAVHLSTYLKVYKVGDIVD
IKANGSIQKGMPHKFYQGKTGVVYNVTKSSVGVIINKMVG
NRYLEKRLNLRVEHIKHSKCRQEFLERVKANAAKRAEAKA
QGVAVQLKRQPAQPRESRIVSTEGNVPQTLAPVPYETFI
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U: |
QKIAKTFTVDVSSPTENGVFDPASYAKYLIDHIKVEGAVG
NLGNAVTVTEDGTVVTVVSTAKFSGKYLKYLTKKYLKKNQ
LRDWIRFVSTKTNEYRLAFY
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V: |
SGNGAQGTKFRISLGLPVGAIMNCADNSGARNLYIIAVKG
SGSRLNRLPAASLGDMVMATVKKGKPELRKKVMPAIVVRQ
AKSWRRRDGVFLYFEDNAGVIANPKGEMKGSAITGPVGKE
CADLWPRVASNSGVVV
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W: |
MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQNSKSASLF
KQRKNPRRIAWTVLFRKHHKKGIT
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X: |
KALKVRTSATFRLPKTLKLARAPKYASKAVPHYNRLDSYK
VIEQPITSETAMKKVEDGNILVFQVSMKANKYQIKKAVKE
LYEVDVLKVNTLVRPNGTKKAYVRLTADYDALDIANRIGY
I
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Y: |
AKQSLDVSSDRRKARKAYFTAPSSQRRVLLSAPLSKELRA
QYGIKALPIRRDDEVLVVRGSKKGQEGKISSVYRLKFAVQ
VDKVTKEKVNGASVPINLHPSKLVITKLHLDKDRKALIQR
KGGKLE
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Z: |
AKFLKAGKVAVVVRGRYAGKKVVIVKPHDEGSKSHPFGHA
LVAGIERYPLKVTKKHGAKKVAKRTKIKPFIKVVNYNHLL
PTRYTLDVEAFKSVVSTETFEQPSQREEAKKVVKKAFEER
HQAGKNQWFFSKLRF
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a: |
PSRFTKTRKHRGHVSAGKGRIGKHRKHPGGRGMAGGQHHH
RINMDKYHPGYFGKVGMRYFHKQQAHFWKPVLNLDKLWTL
IPEDKRDQYLKSASKETAPVIDTLAAGYGKILGKGRIPNV
PVIVKARFVSKLAEEKIRAAGGVVELIA
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b: |
AKSKNHTAHNQTRKAHRNGIKKPKTYKYPSLKGVDPKFRR
NHKHALHGTAKALAAAKK
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c: |
SINQKLALVIKSGKYTLGYKSTVKSLRQGKSKLIIIAANT
PVLRKSELEYYAMLSKTKVYYFQGGNNELGTAVGKLFRVG
VVSILEAGDSDILTTLA
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d: |
LKDVVTREYTINLHKRLHGVSFKKRAPRAVKEIKKFAKLH
MGTDDVRLAPELNQAIWKRGVKGVEYRLRLRISRKRNEEE
DAKNPLFSYVEPVLVASAKGLQTVVVEED
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e: |
ASLPHPKIVKKHTKKFKRHHSDRYHRVAENWRKQKGIDSV
VRRRFRGNISQPKIGYGSNKKTKFLSPSGHKTFLVANVKD
LETLTMHTKTYAAEIAHNISAKNRVVILARAKALGIKVTN
PKGRLAL
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f: |
AESHRLYVKGKHLSYQRSKRVNNPNVSLIKIEGVATPQDA
QFYLGKRIAYVYRASKEVRGSKIRVMWGKVTRTHGNSGVV
RATFRNNLPAKTFGASVRIFLYPSNI
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g: |
AQRVTFRRRNPYNTRSNKIKVVKTPGGILRAQHVKKLATR
PKCGDCGSALQGISTLRPRQYATVSKTHKTVSRAYGGSRC
ANCVKERIIRAFLIEEQKIVKKVVKEQTEAAK
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h: |
AGVKAYELRTKSKEQLASQLVDLKKELAELKVQKLSRPSL
PKIKTVRKSIACVLTVINEQQREAVRQLYKGKKYQPKDLR
AKKTRALRRALTKFEASQVTEKQRKKQIAFPQRKYAIKA
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i: |
TVKTGIAIGLNKGKKVTSMTPAPKISYKKGAASNRTKFVR
SLVREIAGLSPYERRLIDLIRNSGEKRARKVAKKRLGSFT
RAKAKVEEMNNIIAASRRH
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j: |
GKGTPSFGKRHNKSHTLCNRCGRRSFHVQKKTCSSCGYPA
AKTRSYNWGAKAKRRHTTGTGRMRYLKHVSRRFKNGFQTG
SASKASA
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k: |
AREITDIKQFLELTRRADVKTATVKINKKLNKAGKPFRQT
KFKVRGSSSLYTLVINDAGKAKKLIQSLPPTLKVNRL
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l: |
AAQKSFRIKQKMAKAKKQNRPLPQWIRLRTNNTIRYNAKR
RNWRRTKMNI
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o: |
VNVPKTRKTYCKGKTCRKHTQHKVTQYKAGKASLFAQGKR
RYDRKQSGFGGQTKPVFHKKAKTTKKVVLRLECVKCKTRA
QLTLKRCKHFELGGE
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p: |
AKRTKKVGITGKYGVRYGSSLRRQVKKLEIQQHARYDCSF
CGKKTVKRGAAGIWTCSCCKKTVAGGAYTVSTAAAATVRS
TIRRLREMVEA
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w: |
WRATVQIRQKVPHKRTFLFLEQLILKHNAHVDTISISEAK
DGLDFFYAQKNHAVKMIDFLNAVVPIKHKKSEELISQDTH
TGASTYKFSYSVEIVPICKDDLVVLPKKLAKSMGNISQFV
LCSKISNTVQFMDPTTLQTADLSPSVYWRAPFNALADVTQ
LVEFIVLDVDSTGISRGNRVLADITVARTSDLGVNDQVYY
VRSHLGGICHAGDSVMGYFIANSNYNSDLFDGLNIDYVPD
VVLVKKLY
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y: |
MATRTQFENSNEIGVFSKLTNTYCLVAVGGSENFYSAFEA
ELGDAIPIVHTTIAGTRIIGRMTAGNRRGLLVPTQTTDQE
LQHLRNSLPDSVKIQRVEERLSALGNVICCNDYVALVHPD
IDRETEELISDVLGVEVFRQTISGNILVGSYCSLSNQGGL
VHPQTSVQDQEELSSLLQVPLVAGTVNRGSSVVGAGMVVN
DYLAVTGLDTTAPELSVIESIFRLQDA
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z: |
TITAADRRMVSGVTEKQYKKGMKKMQQLEKNAINTQIRRE
IKRVNFQTHYRDELLQ
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Description
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