eF-site ID 5h4p-A
PDB Code 5h4p
Chain A

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Title Structural snapshot of cytoplasmic pre-60S ribosomal particles bound with Nmd3, Lsg1, Tif6 and Reh1
Classification RIBOSOME
Compound 25S ribosomal RNA
Source ORGANISM_COMMON: Baker's yeast; ORGANISM_SCIENTIFIC: Saccharomyces cerevisiae;
Sequence A:  GRVIRNQRKGAGSIFTSHTRLRQGAAKLRTLDYAERHGYI
RGIVKQIVHDSGRGAPLAKVVFRDPYKYRLREEIFIANEG
VHTGQFIYAGKKASLNVGNVLPLGSVPEGTIVSNVEEKPG
DRGALARASGNYVIIIGHNPDENKTRVRLPSGAKKVISSD
ARGVIGVIAGGGRVDKPLLKAGRAFHKYRLKRNSWPKTRG
VAMNPVDHPHGGGNHQHIGKASTISRGAVSGQKAGLIAAR
RTGLLR
Description


Functional site

1) chain A
residue 197-208
type prosite
sequence PKTRGVAMNPVD
description RIBOSOMAL_L2 Ribosomal protein L2 signature. PktRGVAmNPvD
source prosite : PS00467

2) chain A
residue 93
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P05739
source Swiss-Prot : SWS_FT_FI3

3) chain A
residue 119
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P05739
source Swiss-Prot : SWS_FT_FI3

4) chain A
residue 145
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P05739
source Swiss-Prot : SWS_FT_FI3


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