eF-site ID 5h4h-AB
PDB Code 5h4h
Chain A, B

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Title Structure of PIN-domain protein (VapC4 toxin) from Pyrococcus horikoshii determined at 2.2 A resolution
Classification HYDROLASE
Compound Ribonuclease VapC4
Source Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) (VAPC4_PYRHO)
Sequence A:  PLPPDITFDSLALIKMHSQNMKRILEVTLAKFTVNLSIVT
VYRYLTARAYLKKNIEAEFEILKDIYNIVPLLDDIAIKAA
QIEANLIKKEITLDMEDIITATTAIYTNSLLVTDDPKRYE
PIRRFGLDTMPLDKFIKEVELMVE
B:  PLPPDITFDSLALIKMHSQNMKRILEVTLAKFTVNLSIVT
VYRYLTARAYLKKNIEAEFEILKDIYNIVPLLDDIAIKAA
QIEANLIKKEITLDMEDIITATTAIYTNSLLVTDDPKRYE
PIRRFGLDTMPLDKFIKEVELMVEK
Description


Functional site

1) chain A
residue 51
type
sequence Y
description binding site for residue CD A 201
source : AC1

2) chain B
residue 89
type
sequence K
description binding site for residue CD A 201
source : AC1

3) chain B
residue 145
type
sequence E
description binding site for residue CD A 201
source : AC1

4) chain B
residue 30
type
sequence L
description binding site for residue CD B 201
source : AC2

5) chain B
residue 31
type
sequence A
description binding site for residue CD B 201
source : AC2

6) chain B
residue 33
type
sequence F
description binding site for residue CD B 201
source : AC2

7) chain A
residue 10
type BINDING
sequence D
description BINDING => ECO:0000255|HAMAP-Rule:MF_00265
source Swiss-Prot : SWS_FT_FI1

8) chain A
residue 98
type BINDING
sequence D
description BINDING => ECO:0000255|HAMAP-Rule:MF_00265
source Swiss-Prot : SWS_FT_FI1

9) chain B
residue 10
type BINDING
sequence D
description BINDING => ECO:0000255|HAMAP-Rule:MF_00265
source Swiss-Prot : SWS_FT_FI1

10) chain B
residue 98
type BINDING
sequence D
description BINDING => ECO:0000255|HAMAP-Rule:MF_00265
source Swiss-Prot : SWS_FT_FI1


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