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eF-site ID
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5h0r-FGHI |
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PDB Code
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5h0r |
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Chain
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F, G, H, I |
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click to enlarge
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Title
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RNA dependent RNA polymerase ,vp4,dsRNA |
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Classification
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TRANSFERASE/RNA |
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Compound
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RNA-dependent RNA polymerase |
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Source
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Bombyx mori cytoplasmic polyhedrosis virus (BmCPV) (5H0R) |
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Sequence
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F: |
LHNTIFSETRKFTRESFKEIEHLTARLANDSVARHDFLFN
TSIALISDYSGEDSNGNQLQATITIPNEIINPKEYDPSDY
PLAEDESFFKQGHKYDYLVTFRAGSLTNTYEPKTKMYKLH
AALDKLMHVRQRKSRFADLWRELCAVIASLDVWYQTTNYP
LRTYVKLLFHRGDEFPFYESPSQDRIIFNDKSVASILPTF
VYTCCQVGTAIMSGILTHVESIVAMNHFLHCAKDSYIDEK
LKIKGIGRSWYQEALHNVGQATVPVWSQFNEVIGHRRKST
SEPHFVSSTFISLRAKRAELLYPEFNAYINRAIQLSKTQN
DVANYYAACRAMTNDGTFLATLTELSLDAAVFPRIEQRLV
TRPAVLMSNTRHESLKQKYTNGVGSIAQSYLSSFTDEIAK
RVNGIHHDEAWLNFLTTSIVMQAVFAREYRTPERIFKSLK
APIKLVERQQSDRRQRAISGLDNDRLFLSFMPYTIGKQIY
ELNDNAAQGKQAGNAFDIGEMLYWTSQRNVLLSSIDVAGM
DASVTTNTKDIYNTFVLDVASKCTVPRFGPYYAKNMEVFE
VGKRQSQVRYVNAAWQACALEAADSQTSTSYESEIFGQVK
NAEGTYPSGRADTSTHHTVLLQGLVRGNELKRASDGKNSC
LATIKILGDDIMEIFQGSESDTYDHAMSNANILNESGFAT
TAELSQNSIVLLQQLVVNGTFWGFADRISLWTREDTKDIG
RLNLAMMELNALIDDLVFRVRRPEGLKMLGFFCGAICLRR
FTLSVDNKLYDSTYNNLSKYMTLIKYDKNPDFDSTLMSLI
LPLAWLFMPRGGEYPAYPFERRDGTFTEDESMFTARGAYK
RRLLYDVSNIREMIQQNSMALDDDLLHEYGFTGALLLIDL
NILDLIDEVKKEDISPVKVSELATSLEQLGKLGEREKSRR
AASDLKIRGHALSNDIVYGYGLQEKIQKSAMAKRVSSRLH
DVIVAKTRDYKISTIPADALRLHEFEVEDVTVDLLPHAKH
TSYSSLAYNMSFGSDGWFAFALLGGLDRSANLLRLDVASI
RGNYHKFSYDDPVFKQGYKIYKSDATLLNDFFTAISAGPK
EQGILLRAFAYYSLYGNVEYHYVLSPRQLFFLSDNPVSAE
RLVRIPPKYYVSTQCRALYNIFSYLHILRSIANNWGKRLK
MVLHPGLIAYVRGTSQGAILPEA
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| G: |
AIDPLKHPKLYEEYGLYLRPHIRSIKYASLIHSMLAKHAA
RHNGTLINPRMYADMITLGNTKVTYKALTEMSTLVESFLT
LIVFDDEKYQSLIPDYINQLITYTQPHIIPTWQGITDFSD
TYLRSYFKRPFELTASITRSIFNNTGREDAIIRKLYGYGE
YVFIKYEGCLITWTGLYGAVTMMVNLPKRDLGLDVGDDFL
KEYKKLLFHGVITDAIPSGISAKSTVMRISPHKMMNPSGG
ALAVLSKYIEAVVSTNVINATLVVYAEKGAGKTSFLSTYA
QQLSLASGQIVGHLSSDAYGRWLAKNKDVEEPSFEYDYVL
SLDTDDNESYYEQKASELLTSHGISELSQYELLSVRRKVK
MMNEMDEILIAQLDNANTHSERNFYYMVSTGKNTPRTLIV
EGHFNAQDATIARTDTTILLRTINDTTQAMRDRQRSGVVQ
LFLRDTYYRLLPSLHTTVYPFEMLESIKRWKWV
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| H: |
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AA
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| I: |
UUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUU
UU
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Description
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