eF-site ID 5gzo-ABCDHL PDB Code 5gzo Chain A, B, C, D, H, L click to enlarge Title Structure of neutralizing antibody bound to Zika envelope protein Classification VIRAL PROTEIN/IMMUNE SYSTEM Compound Genome polyprotein Source Zika virus (strain Mr 766) (ZIKV) (5GZO) Sequence A:  IRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVTVMAQDKPT VDIELVTTTVSNMAEVRSYCYEASISDMASDSRCPTQGEA YLDKQSDTQYVCKRTLVDRGWGNGCGLFGKGSLVTCAKFA CSKKMTGKSIQPENLEYRIMLSVHGSENRAKVEITPNSPR AEATLGGFGSLGLDCEPRTGLDFSDLYYLTMNNKHWLVHK EWFHDIPLPWHAGADTGTPHWNNKEALVEFKDAHAKRQTV VVLGSQEGAVHTALAGALEAEMDGAKGRLSSGHLKCRLKM DKLRLKGVSYSLCTAAFTFTKIPAETLHGTVTVEVQYAGT DGPCKVPAQMAVDMQTLTPVGRLITANPVITESTENSKMM LELDPPFGDSYIVIGVGEKKITHHWHRSGS B:  IRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVTVMAQDKPT VDIELVTTTVSNMAEVRSYCYEASISDMASDSRCPTQGEA YLDKQSDTQYVCKRTLVDRGWGNGCGLFGKGSLVTCAKFA CSKKMTGKSIQPENLEYRIMLSVHGSENRAKVEITPNSPR AEATLGGFGSLGLDCEPRTGLDFSDLYYLTMNNKHWLVHK EWFHDIPLPWHAGADTGTPHWNNKEALVEFKDAHAKRQTV VVLGSQEGAVHTALAGALEAEMDGAKGRLSSGHLKCRLKM DKLRLKGVSYSLCTAAFTFTKIPAETLHGTVTVEVQYAGT DGPCKVPAQMAVDMQTLTPVGRLITANPVITESTENSKMM LELDPPFGDSYIVIGVGEKKITHHWHRSGS C:  QVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQ PPGKGLEWIGEIYHSGSTNYNPSLKSRVTISVDKSKNQFS LKLSSVTAADTAVYYCARDRDDLSPFDYWGQGTLVTVSSA STKGPSVFPLAPSSGTAALGCLVKDYFPEPVTVSWNSGAL TSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVN HKPSNTKVDKRVEP D:  DIVMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKP GKAPKRLIYAASSLQSGVPSRFSGSGSGTEFTLTISSLQP EDFATYYCLQHNSYPRTFGQGTKVEIKRTVAAPSVFIFPP SDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQ ESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQG LSSPVTKSFNRGE H:  QVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQ PPGKGLEWIGEIYHSGSTNYNPSLKSRVTISVDKSKNQFS LKLSSVTAADTAVYYCARDRDDLSPFDYWGQGTLVTVSSA STKGPSVFPLAPSSGTAALGCLVKDYFPEPVTVSWNSGAL TSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVN HKPSNTKVDKRVEP L:  DIVMTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKP GKAPKRLIYAASSLQSGVPSRFSGSGSGTEFTLTISSLQP EDFATYYCLQHNSYPRTFGQGTKVEIKRTVAAPSVFIFPP SDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQ ESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQG LSSPVTKSFNRGE Description Functional site 1) chain B residue 281 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:32641828 source Swiss-Prot : SWS_FT_FI2 2) chain A residue 281 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:32641828 source Swiss-Prot : SWS_FT_FI2 3) chain B residue 38 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:32641828 source Swiss-Prot : SWS_FT_FI2 4) chain A residue 38 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:32641828 source Swiss-Prot : SWS_FT_FI2 5) chain L residue 192-198 type prosite sequence YACEVTH description IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YACEVTH source prosite : PS00290 6) chain H residue 200-206 type prosite sequence YICNVNH description IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YACEVTH source prosite : PS00290

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