eF-site ID 5gzn-ABCDEGHL PDB Code 5gzn Chain A, B, C, D, E, G, H, L click to enlarge Title Structure of neutralizing antibody bound to Zika envelope protein Classification VIRAL PROTEIN/IMMUNE SYSTEM Compound Genome polyprotein Source (5GZN) Sequence A:  IRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVTVMAQDKPT VDIELVTTTVSNMAEVRSYCYEASISDMASDSRCPTQGEA YLDKQSDTQYVCKRTLVDRGWGNGCGLFGKGSLVTCAKFA CSKKMTGKSIQPENLEYRIMLSVHGSQHNDTGHETDENRA KVEITPNSPRAEATLGGFGSLGLDCEPRTGLDFSDLYYLT MNNKHWLVHKEWFHDIPLPWHAGADTGTPHWNNKEALVEF KDAHAKRQTVVVLGSQEGAVHTALAGALEAEMDGAKGRLS SGHLKCRLKMDKLRLKGVSYSLCTAAFTFTKIPAETLHGT VTVEVQYAGTDGPCKVPAQMAVDMQTLTPVGRLITANPVI TESTENSKMMLELDPPFGDSYIVIGVGEKKITHHWHRSGS TI B:  IRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVTVMAQDKPT VDIELVTTTVSNMAEVRSYCYEASISDMASDSRCPTQGEA YLDKQSDTQYVCKRTLVDRGWGNGCGLFGKGSLVTCAKFA CSKKMTGKSIQPENLEYRIMLSVHGSQNDTGHETDENRAK VEITPNSPRAEATLGGFGSLGLDCEPRTGLDFSDLYYLTM NNKHWLVHKEWFHDIPLPWHAGADTGTPHWNNKEALVEFK DAHAKRQTVVVLGSQEGAVHTALAGALEAEMDGAKGRLSS GHLKCRLKMDKLRLKGVSYSLCTAAFTFTKIPAETLHGTV TVEVQYAGTDGPCKVPAQMAVDMQTLTPVGRLITANPVIT ESTENSKMMLELDPPFGDSYIVIGVGEKKITHHWHRSGST I C:  EVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQA PGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKSTLY LQMNNLRAEDTAVYYCARDHLGWSSIWSAPESFLDYWGQG TLVTVSSASTKGPSVFPLAPSSGGTAALGCLVKDYFPEPV TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLG TQTYICNVNHKPSNTKVDKRVEP D:  QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQL PGTAPKLLIYDSNKRPSGIPDRFSGSKSGTSATLGITGLQ TGDEADYYCGTWDSSLSVWVFGGGTKLTVLGQPKAAPSVT LFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVK AGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVT HEGSTVEKTVAPTE E:  VTTTVSNMAEVRSYCYEASISDMASDSRCPTQGEAYLDKQ SDTQYVCKRTLVDRGWGNGCGLFGKGSLVTCAKFACSKKM TGKSIQPENLEYRIMDFSDLYYLTMNNKHWLVHKEWFHDI PLPWHAGADTGTPHWNNKEALVEFKDAHAKRQTVVVLGSQ EGAVHTALAGALEAEMDGAKGRLS G:  ELVTTTVSNMAEVRSYCYEASISDMASDSRCPTQGEAYLD KQSDTQYVCKRTLVDRGWGNGCGLFGKGSLVTCAKFACSK KMTGKSIQPENLEYRIMDFSDLYYLTMNNKHWLVHKEWFH DIPLPWHAGATPHWNNKEALVEFKDAHAKRQTVVVLGSQE GAVHTALAGALEAEMDGAKGRLS H:  EVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQA PGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKSTLY LQMNNLRAEDTAVYYCARDHLGWSSIWSAPESFLDYWGQG TLVTVSSASTKGPSVFPLAPSSSGGTAALGCLVKDYFPEP VTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSL GTQTYICNVNHKPSNTKVDKRVEP L:  QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQL PGTAPKLLIYDSNKRPSGIPDRFSGSKSGTSATLGITGLQ TGDEADYYCGTWDSSLSVWVFGGGTKLTVLGQPKAAPSVT LFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVK AGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVT HEGSTVEKTVAPT Description Functional site 1) chain L residue 195-201 type prosite sequence YSCQVTH description IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YICNVNH source prosite : PS00290 2) chain H residue 208-214 type prosite sequence YICNVNH description IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YICNVNH source prosite : PS00290 3) chain A residue 154 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine; by host => ECO:0000250|UniProtKB:A0A024B7W1 source Swiss-Prot : SWS_FT_FI1 4) chain B residue 154 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine; by host => ECO:0000250|UniProtKB:A0A024B7W1 source Swiss-Prot : SWS_FT_FI1 5) chain E residue 281 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:32641828 source Swiss-Prot : SWS_FT_FI2 6) chain G residue 281 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:32641828 source Swiss-Prot : SWS_FT_FI2 7) chain A residue 281 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:32641828 source Swiss-Prot : SWS_FT_FI2 8) chain B residue 38 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:32641828 source Swiss-Prot : SWS_FT_FI2 9) chain B residue 281 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:32641828 source Swiss-Prot : SWS_FT_FI2 10) chain A residue 38 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:32641828 source Swiss-Prot : SWS_FT_FI2

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