eF-site ID 5flx-g PDB Code 5flx Chain g click to enlarge Title Mammalian 40S HCV-IRES complex Classification RIBOSOME Compound 18S RRNA Source ORGANISM_COMMON: RABBIT; ORGANISM_SCIENTIFIC: ORYCTOLAGUS CUNICULUS; Sequence g:  TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTII MWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSG SWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIV SGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSS NPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVS PDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCF SPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKA EPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG Description (1)  40S RIBOSOMAL PROTEIN SA, 40S RIBOSOMAL PROTEIN S3A, 40S RIBOSOMAL PROTEIN S2, 40S RIBOSOMAL PROTEIN S4, Y ISOFORM 1, 40S RIBOSOMAL PROTEIN S5, 40S RIBOSOMAL PROTEIN S6, 40S RIBOSOMAL PROTEIN S7, 40S RIBOSOMAL PROTEIN S8, 40S RIBOSOMAL PROTEIN S9, 40S RIBOSOMAL PROTEIN S10, 40S RIBOSOMAL PROTEIN S11, 40S RIBOSOMAL PROTEIN S12, 40S RIBOSOMAL PROTEIN S13, 40S RIBOSOMAL PROTEIN S14, 40S RIBOSOMAL PROTEIN S15, 40S RIBOSOMAL PROTEIN S16, 40S RIBOSOMAL PROTEIN S17, 40S RIBOSOMAL PROTEIN S18, 40S RIBOSOMAL PROTEIN S19, 40S RIBOSOMAL PROTEIN S20, 40S RIBOSOMAL PROTEIN S21, 40S RIBOSOMAL PROTEIN S15A, 40S RIBOSOMAL PROTEIN S23, 40S RIBOSOMAL PROTEIN S24, 40S RIBOSOMAL PROTEIN S25, 40S RIBOSOMAL PROTEIN S26, 40S RIBOSOMAL PROTEIN S27, 40S RIBOSOMAL PROTEIN S28, 40S RIBOSOMAL PROTEIN S29, 40S RIBOSOMAL PROTEIN S30, UBIQUITIN-40S RIBOSOMAL PROTEIN S27A, GUANINE NUCLEOTIDE-BINDING PROTEIN SUBUNIT BETA-2-LIKE 1/RNA Complex Functional site 1) chain g residue 78-92 type prosite sequence ALSGSWDGTLRLWDL description WD_REPEATS_1 Trp-Asp (WD) repeats signature. ALSGswDgTLRLWDL source prosite : PS00678 2) chain g residue 120-134 type prosite sequence IVSGSRDKTIKLWNT description WD_REPEATS_1 Trp-Asp (WD) repeats signature. ALSGswDgTLRLWDL source prosite : PS00678 3) chain g residue 165-179 type prosite sequence IVSCGWDKLVKVWNL description WD_REPEATS_1 Trp-Asp (WD) repeats signature. ALSGswDgTLRLWDL source prosite : PS00678 4) chain g residue 207-221 type prosite sequence CASGGKDGQAMLWDL description WD_REPEATS_1 Trp-Asp (WD) repeats signature. ALSGswDgTLRLWDL source prosite : PS00678 5) chain g residue 52 type MOD_RES sequence Y description Phosphotyrosine; by ABL1 => ECO:0000305|PubMed:19423701 source Swiss-Prot : SWS_FT_FI4 6) chain g residue 277 type MOD_RES sequence T description Phosphothreonine; by viral VacV B1 kinase => ECO:0000269|PubMed:28636603 source Swiss-Prot : SWS_FT_FI9 7) chain g residue 6 type MOD_RES sequence T description Phosphothreonine => ECO:0007744|PubMed:23186163 source Swiss-Prot : SWS_FT_FI3 8) chain g residue 10 type MOD_RES sequence T description Phosphothreonine => ECO:0007744|PubMed:23186163 source Swiss-Prot : SWS_FT_FI3 9) chain g residue 96 type MOD_RES sequence T description Phosphothreonine => ECO:0007744|PubMed:23186163 source Swiss-Prot : SWS_FT_FI3 10) chain g residue 2 type MOD_RES sequence T description N-acetylthreonine; in Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed => ECO:0000269|Ref.9, ECO:0007744|PubMed:19413330, ECO:0007744|PubMed:21406692, ECO:0007744|PubMed:22223895, ECO:0007744|PubMed:22814378 source Swiss-Prot : SWS_FT_FI2 11) chain g residue 228 type MOD_RES sequence Y description Phosphotyrosine => ECO:0000269|PubMed:11279199 source Swiss-Prot : SWS_FT_FI7 12) chain g residue 276 type MOD_RES sequence S description Phosphoserine; by viral VacV B1 kinase => ECO:0000269|PubMed:28636603, ECO:0007744|PubMed:23186163 source Swiss-Prot : SWS_FT_FI8 13) chain g residue 279 type MOD_RES sequence S description Phosphoserine; by viral VacV B1 kinase => ECO:0000269|PubMed:28636603 source Swiss-Prot : SWS_FT_FI10 14) chain g residue 278 type MOD_RES sequence S description Phosphoserine; by viral VacV B1 kinase => ECO:0000269|PubMed:28636603 source Swiss-Prot : SWS_FT_FI10 15) chain g residue 130 type MOD_RES sequence K description N6-acetyllysine => ECO:0007744|PubMed:19608861 source Swiss-Prot : SWS_FT_FI5 16) chain g residue 183 type MOD_RES sequence K description N6-acetyllysine => ECO:0000250|UniProtKB:P68040 source Swiss-Prot : SWS_FT_FI6

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