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eF-site ID
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5fja-B |
PDB Code
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5fja |
Chain
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B |
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click to enlarge
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Title
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Cryo-EM structure of yeast RNA polymerase III at 4.7 A |
Classification
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TRANSCRIPTION |
Compound
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DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC1 |
Source
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ORGANISM_COMMON: BAKER'S YEAST; ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; |
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Sequence
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B: |
DEINTAQDKWHLLPAFLKVKGLVKQHLDSFNYFVDTDLKK
IIKANQLILSDVDPEFYLKYVDIRVGKKSSSSTKDYLTPP
HECRLRDMTYSAPIYVDIEYTRGRNIIMHKDVEIGRMPIM
LRSNKCILYDADESKMAKLNECPLDPGGYFIVNGTEKVIL
VQEQLSKNRIIVEADEKKGIVQASVTSSTHERKSKTYVIT
KNGKIYLKHNSIAEEIPIAIVLKACGILSDLEIMQLVCGN
DSSYQDIFAVNLEESSKLDIYTQQQALEYIGAKVKTMRRQ
KLTILQEGIEAIATTVIAHLTVEALDFREKALYIAMMTRR
VVMAMYNPKMIDDRDYVGNKRLELAGQLISLLFEDLFKKF
NNDFKLSIDKVLKKPNRAMEYDALLSINVHSNNITSGLNR
AISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISS
QFEKSRKVSGPRALQPSQFGMLCTADTPEGEACGLVKNLA
LMTHITTDDEEEPIKKLCYVLGVEDITLIDSASLHLNYGV
YLNGTLIGSIRFPTKFVTQFRHLRRTGKVSEFISIYSNSH
QMAVHIATDGGRICRPLIIVSDGQSRVKDIHLRKLLDGEL
DFDDFLKLGLVEYLDVNEENDSYIALYEKDIVPSMTHLEI
EPFTILGAVAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAY
NQFKRIDTLLYLMTYPQQPMVKTKTIELIDYDKLPAGQNA
TVAVMSYSGYDIEDALVLNKSSIDRGFGRCETRRKTTTVL
KRYANHTQDIIGGMRVDENGDPIWQHQSLGPDGLGEVGMK
VQSGQIYINKSVPTNSADAPNPNNVNVQTQYREAPVIYRG
PEPSHIDQVMMSVSDNDQALIKVLLRQNRRPELGDKFSSR
HGQKGVCGIIVKQEDMPFNDQGIVPDIIMNPHGFPSRMTV
GKMIELISGKAGVLNGTLEYGTCFGGSKLEDMSKILVDQG
FNYSGKDMLYSGITGECLQAYIFFGPIYYQKLKHMVLDKM
HARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGA
SQLLLERLMISSDAFEVDVCDKCGLMGYSGWCTTCKSAEN
IIKMTIPYAAKLLFQELLSMNIAPRLRLEDIFQQ
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Description
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(1) |
DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC1 (E.C.2.7.7.6), DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC2 (E.C.2.7.7.6), DNA-DIRECTED RNA POLYMERASES I AND III SUBUNIT RPAC1, DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC9, DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 1, DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 2, DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC8, DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 3, DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC10, DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 5, DNA-DIRECTED RNA POLYMERASES I AND III SUBUNIT RPAC2, DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 4, DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC5, DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC4, DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC3, DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC6, DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC7
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Functional site
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1)
|
chain |
B |
residue |
1095 |
type |
|
sequence |
C
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description |
BINDING SITE FOR RESIDUE ZN B 2000
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source |
: AC3
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2)
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chain |
B |
residue |
1097 |
type |
|
sequence |
K
|
description |
BINDING SITE FOR RESIDUE ZN B 2000
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source |
: AC3
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3)
|
chain |
B |
residue |
1098 |
type |
|
sequence |
C
|
description |
BINDING SITE FOR RESIDUE ZN B 2000
|
source |
: AC3
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4)
|
chain |
B |
residue |
1107 |
type |
|
sequence |
C
|
description |
BINDING SITE FOR RESIDUE ZN B 2000
|
source |
: AC3
|
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5)
|
chain |
B |
residue |
1110 |
type |
|
sequence |
C
|
description |
BINDING SITE FOR RESIDUE ZN B 2000
|
source |
: AC3
|
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6)
|
chain |
B |
residue |
909-921 |
type |
prosite |
sequence |
GDKFSSRHGQKGV
|
description |
RNA_POL_BETA RNA polymerases beta chain signature. GdKFSSrHGQKGV
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source |
prosite : PS01166
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