eF-site ID 5fja-A
PDB Code 5fja
Chain A

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Title Cryo-EM structure of yeast RNA polymerase III at 4.7 A
Classification TRANSCRIPTION
Compound DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC1
Source ORGANISM_COMMON: BAKER'S YEAST; ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE;
Sequence A:  KEVVVSETPKRIKGLEFSALSAADIVAQSEVEVSTRDLFD
LEKDRAPKANGALDPKMGVSSSSLECATCHGNLASCHGHF
GHLKLALPVFHIGYFKATIQILQGICKNCSAILLSETDKR
QFLHELRRPGVDNLRRMGILKKILDQCKKQRRCLHCGALN
GVVKKAAALKIIHDTFRWVGKKSAPEKDIWVGEWKEVLAH
NPELERYVKRCMDDLNPLKTLNLFKQIKSADCELLGIDAT
VPSGRPETYIWRYLPAPPVCIRPSVMMQDSPASNEDDLTV
KLTEIVWTSSLIKAGLDKGISINNMMEHWDYLQLTVAMYI
NKPIRGFCQRLKGKQGRFRGNLSGKRVDFSGRTVISPDPN
LSIDEVAVPDRVAKVLTYPEKVTRYNRHKLQELIVNGPNV
HPGANYLLKRNEDARRNLRYGDRMKLAKNLQIGDVVERHL
EDGDVVLFNRQPSLHRLSILSHYAKIRPWRTFRLNECVCT
PYNADFDGDEMNLHVPQTEEARAEAINLMGVKNNLLTPKS
GEPIIAATQDFITGSYLISHKDSFYDRATLTQLLSMMSDG
IEHFDIPPPAIMKPYYLWTGKQVFSLLIKPNHNSPVVINL
DAKNKVFVPPKSKSLPNEMSQNDGFVIIRGSQILSGVMDK
SVLGDGKKHSVFYTILRDYGPQEAANAMNRMAKLCARFLG
NRGFSIGINDVTPADDLKQKKEELVEIAYHKCDELITLFN
KGELETQPGCNEEQTLEAKIGGLLSKVREEVGDVCINELD
NWNAPLIMATCGSKGSTLNVSQMVAVVGQQIISGNRVPDG
FQDRSLPHFPKNSKTPQSKGFVRNSFFSGLSPPEFLFHAI
SGREGLVDTAVKTAETGYMSRRLMKSLEDLSCQYDNTVRT
SANGIVQFTYGGDGLDPLEMEGNAQPVNFNRSWDHAYNIT
FNNQDKGLLPYAIMETANEILGPLEERLVRYDNSGCLVKR
EDLNKAEYVDQYDAERDFYHSLREYINGKATALANLRKSR
GMLGLLEPPAKELQGIDPDETVPDNVKTSVSQLYRISEKS
VRKFLEIALFKYRKARLEPGTAIGAIGAQSIGEPMNVTLG
VPRIKEIINASKVISTPIINAVLVNDNDERAARVVKGRVE
KTLLSDVAFYVQDVYKDNLSFIQVRIDLGTIDKLQLELTI
EDIAVAITRASKLKIQASDVNIIGKDRIAINVFPSENDVF
YRMQQLRRALPDVVVKGLPDISRAVINIRDDGKRELLVEG
YGLRDVMCTDGVIGSRTTTNHVLEVFSVLGIEAARYSIIR
EINYTMSNHGMSVDPRHIQLLGDVMTYKGEVLGITRFGLS
KMRDSVLQLASFEKTTDHLFDAAFYMKKDAVEGVSECIIL
GQTMSIGTGSFKVVKGTNISEKDLVPKRCLFESLSNEAAL
KAN
Description (1)  DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC1 (E.C.2.7.7.6), DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC2 (E.C.2.7.7.6), DNA-DIRECTED RNA POLYMERASES I AND III SUBUNIT RPAC1, DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC9, DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 1, DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 2, DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC8, DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 3, DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC10, DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 5, DNA-DIRECTED RNA POLYMERASES I AND III SUBUNIT RPAC2, DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 4, DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC5, DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC4, DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC3, DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC6, DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC7


Functional site

1) chain A
residue 67
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 2000
source : AC1

2) chain A
residue 69
type
sequence T
description BINDING SITE FOR RESIDUE ZN A 2000
source : AC1

3) chain A
residue 70
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 2000
source : AC1

4) chain A
residue 77
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 2000
source : AC1

5) chain A
residue 80
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 2000
source : AC1

6) chain A
residue 107
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 2001
source : AC2

7) chain A
residue 109
type
sequence N
description BINDING SITE FOR RESIDUE ZN A 2001
source : AC2

8) chain A
residue 110
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 2001
source : AC2

9) chain A
residue 154
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 2001
source : AC2

10) chain A
residue 156
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 2001
source : AC2

11) chain A
residue 157
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 2001
source : AC2

12) chain A
residue 515
type MOD_RES
sequence D
description Phosphothreonine => ECO:0007744|PubMed:18407956
source Swiss-Prot : SWS_FT_FI1

13) chain A
residue 107
type MOD_RES
sequence C
description Phosphothreonine => ECO:0007744|PubMed:18407956
source Swiss-Prot : SWS_FT_FI1

14) chain A
residue 110
type MOD_RES
sequence C
description Phosphothreonine => ECO:0007744|PubMed:18407956
source Swiss-Prot : SWS_FT_FI1

15) chain A
residue 154
type MOD_RES
sequence C
description Phosphothreonine => ECO:0007744|PubMed:18407956
source Swiss-Prot : SWS_FT_FI1

16) chain A
residue 511
type MOD_RES
sequence D
description Phosphothreonine => ECO:0007744|PubMed:18407956
source Swiss-Prot : SWS_FT_FI1

17) chain A
residue 513
type MOD_RES
sequence D
description Phosphothreonine => ECO:0007744|PubMed:18407956
source Swiss-Prot : SWS_FT_FI1


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