eF-site ID 5f6l-A
PDB Code 5f6l
Chain A

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Title The crystal structure of MLL1 (N3861I/Q3867L) in complex with RbBP5 and Ash2L
Classification PROTEIN BINDING/TRANSFERASE
Compound Retinoblastoma-binding protein 5
Source Homo sapiens (Human) (KMT2A_HUMAN)
Sequence A:  LPMPMRFRHLKKTSKEAVGVYRSPIHGRGLFCKRNIDAGE
MVIEYAGIVIRSILTDKREKYYDSKGIGCYMFRIDDSEVV
DATMHGNAARFINHSCEPNCYSRVINIDGQKHIVIFAMRK
IYRGEELTYDYKFPIEDKLPCNCGAKKCRKFLN
Description


Functional site

1) chain A
residue 3838
type
sequence I
description binding site for residue SAH A 4001
source : AC1

2) chain A
residue 3839
type
sequence H
description binding site for residue SAH A 4001
source : AC1

3) chain A
residue 3840
type
sequence G
description binding site for residue SAH A 4001
source : AC1

4) chain A
residue 3841
type
sequence R
description binding site for residue SAH A 4001
source : AC1

5) chain A
residue 3903
type
sequence R
description binding site for residue SAH A 4001
source : AC1

6) chain A
residue 3904
type
sequence F
description binding site for residue SAH A 4001
source : AC1

7) chain A
residue 3906
type
sequence N
description binding site for residue SAH A 4001
source : AC1

8) chain A
residue 3907
type
sequence H
description binding site for residue SAH A 4001
source : AC1

9) chain A
residue 3944
type
sequence Y
description binding site for residue SAH A 4001
source : AC1

10) chain A
residue 3956
type
sequence P
description binding site for residue SAH A 4001
source : AC1

11) chain A
residue 3957
type
sequence C
description binding site for residue SAH A 4001
source : AC1

12) chain A
residue 3958
type
sequence N
description binding site for residue SAH A 4001
source : AC1

13) chain A
residue 3968
type
sequence L
description binding site for residue SAH A 4001
source : AC1

14) chain A
residue 3909
type
sequence C
description binding site for residue ZN A 4002
source : AC2

15) chain A
residue 3957
type
sequence C
description binding site for residue ZN A 4002
source : AC2

16) chain A
residue 3959
type
sequence C
description binding site for residue ZN A 4002
source : AC2

17) chain A
residue 3964
type
sequence C
description binding site for residue ZN A 4002
source : AC2

18) chain A
residue 3883
type BINDING
sequence Y
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00190, ECO:0000269|PubMed:19187761, ECO:0000269|PubMed:26886794, ECO:0007744|PDB:2W5Z, ECO:0007744|PDB:5F5E
source Swiss-Prot : SWS_FT_FI2

19) chain A
residue 3909
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:16990798, ECO:0000269|PubMed:19187761, ECO:0007744|PDB:2W5Y, ECO:0007744|PDB:2W5Z, ECO:0007744|PDB:5F5E, ECO:0007744|PDB:5F6L
source Swiss-Prot : SWS_FT_FI4

20) chain A
residue 3957
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:16990798, ECO:0000269|PubMed:19187761, ECO:0007744|PDB:2W5Y, ECO:0007744|PDB:2W5Z, ECO:0007744|PDB:5F5E, ECO:0007744|PDB:5F6L
source Swiss-Prot : SWS_FT_FI4

21) chain A
residue 3959
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:16990798, ECO:0000269|PubMed:19187761, ECO:0007744|PDB:2W5Y, ECO:0007744|PDB:2W5Z, ECO:0007744|PDB:5F5E, ECO:0007744|PDB:5F6L
source Swiss-Prot : SWS_FT_FI4

22) chain A
residue 3964
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:16990798, ECO:0000269|PubMed:19187761, ECO:0007744|PDB:2W5Y, ECO:0007744|PDB:2W5Z, ECO:0007744|PDB:5F6L
source Swiss-Prot : SWS_FT_FI5

23) chain A
residue 3839
type BINDING
sequence H
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00190, ECO:0000269|PubMed:19187761, ECO:0000269|PubMed:26886794, ECO:0007744|PDB:2W5Y, ECO:0007744|PDB:5F5E, ECO:0007744|PDB:5F6L
source Swiss-Prot : SWS_FT_FI1

24) chain A
residue 3841
type BINDING
sequence R
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00190, ECO:0000269|PubMed:19187761, ECO:0000269|PubMed:26886794, ECO:0007744|PDB:2W5Y, ECO:0007744|PDB:5F5E, ECO:0007744|PDB:5F6L
source Swiss-Prot : SWS_FT_FI1

25) chain A
residue 3958
type BINDING
sequence N
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00190, ECO:0000269|PubMed:19187761, ECO:0000269|PubMed:26886794, ECO:0007744|PDB:2W5Y, ECO:0007744|PDB:5F5E, ECO:0007744|PDB:5F6L
source Swiss-Prot : SWS_FT_FI1

26) chain A
residue 3882
type MOD_RES
sequence C
description S-methylcysteine; by autocatalysis => ECO:0000269|PubMed:24235145
source Swiss-Prot : SWS_FT_FI6

27) chain A
residue 3906
type BINDING
sequence N
description BINDING => ECO:0000269|PubMed:19187761, ECO:0000269|PubMed:26886794, ECO:0007744|PDB:2W5Y, ECO:0007744|PDB:5F5E, ECO:0007744|PDB:5F6L
source Swiss-Prot : SWS_FT_FI3


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