eF-site ID 5f6c-B
PDB Code 5f6c
Chain B

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Title The structure of E. coli RNase E catalytically inactive mutant with RNA bound
Classification HYDROLASE
Compound Ribonuclease E
Source (5F6C)
Sequence B:  HMKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKA
NIYKGKITRIEPSLEAAFVDYGAERHGFLPLKEIAREYFP
ANYSAHGRPNIKDVLREGQEVIVQIDKEERGNKGAALTTF
ISLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALASLE
LPEGMGLIVRTAGVGKSAEALQWDLSFRLKHWEAIKKAAE
SRPAPFLIHQESNVIVRAFRDYLRQDIGEILIDNPKVLEL
ARQHIAALGRPDFSSKIKLYTGEIPLFSHYQIESQIESAF
QREVRLPSGGSIVIDSTEALTAIRINSARATRGGDIEETA
FNTNLEAADEIARQLRLRDLGGLIVIRFIDMTPVRHQRAV
ENRLREAVRQDRARIQISHISRFGLLEMSRQRLSPSLGES
SHHVCPRCSGTGTVRDNESLSLSILRLIEEEALKENTQEV
HAIVPVPIASYLLNEKRSAVNAIETRQDGVRCVIVPNDQM
ETPHYHVLRVRKGEETPTLSYMLPKLHEEA
Description


Functional site

1) chain B
residue 404
type
sequence C
description binding site for residue ZN A 602
source : AC2

2) chain B
residue 407
type
sequence C
description binding site for residue ZN A 602
source : AC2

3) chain B
residue 28
type
sequence D
description binding site for residue MG B 601
source : AC3

4) chain B
residue 216
type
sequence R
description binding site for residue MG B 601
source : AC3

5) chain B
residue 393
type
sequence S
description binding site for residue MG B 601
source : AC3

6) chain B
residue 303
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:16237448
source Swiss-Prot : SWS_FT_FI1

7) chain B
residue 346
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:16237448
source Swiss-Prot : SWS_FT_FI1

8) chain B
residue 404
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:15779893, ECO:0000269|PubMed:18682225
source Swiss-Prot : SWS_FT_FI2

9) chain B
residue 407
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:15779893, ECO:0000269|PubMed:18682225
source Swiss-Prot : SWS_FT_FI2


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