|
|
eF-site ID
|
5ecd-B |
|
PDB Code
|
5ecd |
|
Chain
|
B |
|
click to enlarge
|
|
|
Title
|
Structure of the Shigella flexneri VapC mutant D98N crystal form 1 |
|
Classification
|
HYDROLASE |
|
Compound
|
tRNA(fMet)-specific endonuclease VapC |
|
Source
|
Shigella flexneri (VAPC_SHIFL) |
|
|
Sequence
|
B: |
HLKFMLDTNICIFTIKNKPASVRERFNLNQGKMCISSVTL
MELIYGAEKSQMPERNLAVIEGFVSRIDVLDYDAAAATHT
GQIRAELARQGRPVGPFNQMIAGHARSRGLIIVTNNTREF
ERVGGLRTEDWS
|
|
|
Description
|
(1) |
tRNA(fMet)-specific endonuclease VapC (E.C.3.1.-.-)
|
|
Functional site
|
|
|
1)
|
chain |
B |
| residue |
9 |
| type |
|
| sequence |
N
|
| description |
binding site for residue EPE B 201
|
| source |
: AC2
|
|
|
2)
|
chain |
B |
| residue |
42 |
| type |
|
| sequence |
E
|
| description |
binding site for residue EPE B 201
|
| source |
: AC2
|
|
|
3)
|
chain |
B |
| residue |
95 |
| type |
|
| sequence |
G
|
| description |
binding site for residue EPE B 201
|
| source |
: AC2
|
|
|
4)
|
chain |
B |
| residue |
96 |
| type |
|
| sequence |
P
|
| description |
binding site for residue EPE B 201
|
| source |
: AC2
|
|
|
5)
|
chain |
B |
| residue |
97 |
| type |
|
| sequence |
F
|
| description |
binding site for residue EPE B 201
|
| source |
: AC2
|
|
|
6)
|
chain |
B |
| residue |
98 |
| type |
|
| sequence |
N
|
| description |
binding site for residue EPE B 201
|
| source |
: AC2
|
|
|
7)
|
chain |
B |
| residue |
7 |
| type |
BINDING |
| sequence |
D
|
| description |
BINDING => ECO:0000255
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
8)
|
chain |
B |
| residue |
98 |
| type |
BINDING |
| sequence |
N
|
| description |
BINDING => ECO:0000255
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
|