eF-site ID 5e8k-A
PDB Code 5e8k
Chain A

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Title Crystal structure of polyprenyl pyrophosphate synthase 2 from Arabidopsis thaliana
Classification TRANSFERASE
Compound Geranylgeranyl pyrophosphate synthase 10, mitochondrial
Source (GGPPA_ARATH)
Sequence A:  YDFKFMSYMVNKAKSVNKALEEAVPLREPELKIREAMRYT
LLSDGKRVRPMLCLAACELVGGQESTAMSAACAIEMLHAS
SLILDDLPCMDNDSLRRGKPTNHIVFGESIAILASQALIA
LAVQKTTSSTFADVPPERILKTVQEMVKAVEGLVAGQQAD
LAGTGLEHLEFIHIHKTAALLEAAAVMGAIMGGGSDEEIE
RLRSYARCIGLMFQVVDDVLDKLTYPRLMGVEKSKEYAER
LNIEAREHLLGFDIDKVAPLVSLADYIVNR
Description


Functional site

1) chain A
residue 223-235
type prosite
sequence IGLMFQVVDDVLD
description POLYPRENYL_SYNTHASE_2 Polyprenyl synthases signature 2. IGlmFQVvDDVlD
source prosite : PS00444

2) chain A
residue 88-104
type prosite
sequence LILDDLPCMDNDSLRRG
description POLYPRENYL_SYNTHASE_1 Polyprenyl synthases signature 1. LIlDDlpcmDndslRRG
source prosite : PS00723

3) chain A
residue 52
type BINDING
sequence K
description BINDING => ECO:0000250|UniProtKB:P14324
source Swiss-Prot : SWS_FT_FI1

4) chain A
residue 55
type BINDING
sequence R
description BINDING => ECO:0000250|UniProtKB:P14324
source Swiss-Prot : SWS_FT_FI1

5) chain A
residue 91
type BINDING
sequence D
description BINDING => ECO:0000250|UniProtKB:P14324
source Swiss-Prot : SWS_FT_FI1

6) chain A
residue 97
type BINDING
sequence D
description BINDING => ECO:0000250|UniProtKB:P14324
source Swiss-Prot : SWS_FT_FI1

7) chain A
residue 103
type BINDING
sequence R
description BINDING => ECO:0000250|UniProtKB:P14324
source Swiss-Prot : SWS_FT_FI1

8) chain A
residue 84
type BINDING
sequence H
description BINDING => ECO:0000250|UniProtKB:Q12051
source Swiss-Prot : SWS_FT_FI2

9) chain A
residue 102
type BINDING
sequence R
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI3

10) chain A
residue 190
type BINDING
sequence K
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI3

11) chain A
residue 191
type BINDING
sequence T
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI3

12) chain A
residue 228
type BINDING
sequence Q
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI3

13) chain A
residue 255
type BINDING
sequence K
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI3


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