eF-site ID 5e7c-c
PDB Code 5e7c
Chain c

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Title Macromolecular diffractive imaging using imperfect crystals - Bragg data
Classification PHOTOSYNTHESIS
Compound Photosystem II protein D1 1
Source ORGANISM_SCIENTIFIC: Thermosynechococcus elongatus (strain BP-1);
Sequence c:  ATNRDQESSGFAWWAGNARLINLSGKLLGAHVAHAGLIVF
WAGAMTLFELAHFIPEKPMYEQGLILIPHIATLGWGVGPG
GEVVDTFPFFVVGVVHLISSAVLGFGGVYHAIRGPETLEE
YSSFFGYDWKDKNKMTTILGFHLIVLGIGALLLVAKAMFF
GGLYDTWAPGGGDVRVITNPTLDPRVIFGYLLKSPFGGEG
WIVSVNNLEDVVGGHIWIGLICIAGGIWHILTTPFGWARR
AFIWSGEAYLSYSLGALSMMGFIATCFVWFNNTVYPSEFY
GPTGPEASQAQAMTFLIRDQKLGANVGSAQGPTGLGKYLM
RSPTGEIIFGGETMRFWDFRGPWLEPLRGPNGLDLNKIKN
DIQPWQERRAAEYMTHAPLGSLNSVGGVATEINSVNFVSP
RSWLATSHFVLAFFFLVGHLWHAGRARAAAAGFEKGIDRE
SEPVLSMPSLD
Description


Functional site

1) chain c
residue 354
type
sequence E
description binding site for residue OEX a 601
source : AK9

2) chain c
residue 357
type
sequence R
description binding site for residue OEX a 601
source : AK9

3) chain c
residue 28
type
sequence Q
description binding site for residue SQD a 610
source : AL9

4) chain c
residue 34
type
sequence A
description binding site for residue SQD a 610
source : AL9

5) chain c
residue 36
type
sequence W
description binding site for residue SQD a 610
source : AL9

6) chain c
residue 214
type
sequence L
description binding site for residue LMG a 611
source : AM1

7) chain c
residue 221
type
sequence E
description binding site for residue LMG a 611
source : AM1

8) chain c
residue 223
type
sequence W
description binding site for residue LMG a 611
source : AM1

9) chain c
residue 284
type
sequence F
description binding site for residue LMG a 611
source : AM1

10) chain c
residue 36
type
sequence W
description binding site for residue LHG a 614
source : AM4

11) chain c
residue 443
type
sequence W
description binding site for residue LHG a 614
source : AM4

12) chain c
residue 447
type
sequence R
description binding site for residue LHG a 614
source : AM4

13) chain c
residue 353
type
sequence G
description binding site for residue CL c 501
source : AP3

14) chain c
residue 354
type
sequence E
description binding site for residue CL c 501
source : AP3

15) chain c
residue 95
type
sequence L
description binding site for residue CLA c 502
source : AP4

16) chain c
residue 168
type
sequence L
description binding site for residue CLA c 502
source : AP4

17) chain c
residue 171
type
sequence G
description binding site for residue CLA c 502
source : AP4

18) chain c
residue 172
type
sequence A
description binding site for residue CLA c 502
source : AP4

19) chain c
residue 175
type
sequence L
description binding site for residue CLA c 502
source : AP4

20) chain c
residue 233
type
sequence V
description binding site for residue CLA c 502
source : AP4

21) chain c
residue 237
type
sequence H
description binding site for residue CLA c 502
source : AP4

22) chain c
residue 240
type
sequence I
description binding site for residue CLA c 502
source : AP4

23) chain c
residue 282
type
sequence M
description binding site for residue CLA c 502
source : AP4

24) chain c
residue 285
type
sequence I
description binding site for residue CLA c 502
source : AP4

25) chain c
residue 289
type
sequence F
description binding site for residue CLA c 502
source : AP4

26) chain c
residue 296
type
sequence V
description binding site for residue CLA c 502
source : AP4

27) chain c
residue 297
type
sequence Y
description binding site for residue CLA c 502
source : AP4

28) chain c
residue 63
type
sequence W
description binding site for residue CLA c 503
source : AP5

29) chain c
residue 91
type
sequence H
description binding site for residue CLA c 503
source : AP5

30) chain c
residue 178
type
sequence K
description binding site for residue CLA c 503
source : AP5

31) chain c
residue 182
type
sequence F
description binding site for residue CLA c 503
source : AP5

32) chain c
residue 279
type
sequence L
description binding site for residue CLA c 503
source : AP5

33) chain c
residue 282
type
sequence M
description binding site for residue CLA c 503
source : AP5

34) chain c
residue 286
type
sequence A
description binding site for residue CLA c 503
source : AP5

35) chain c
residue 297
type
sequence Y
description binding site for residue CLA c 503
source : AP5

36) chain c
residue 426
type
sequence L
description binding site for residue CLA c 503
source : AP5

37) chain c
residue 430
type
sequence H
description binding site for residue CLA c 503
source : AP5

38) chain c
residue 433
type
sequence L
description binding site for residue CLA c 503
source : AP5

39) chain c
residue 437
type
sequence F
description binding site for residue CLA c 503
source : AP5

40) chain c
residue 60
type
sequence I
description binding site for residue CLA c 504
source : AP6

41) chain c
residue 61
type
sequence V
description binding site for residue CLA c 504
source : AP6

42) chain c
residue 68
type
sequence T
description binding site for residue CLA c 504
source : AP6

43) chain c
residue 88
type
sequence L
description binding site for residue CLA c 504
source : AP6

44) chain c
residue 91
type
sequence H
description binding site for residue CLA c 504
source : AP6

45) chain c
residue 95
type
sequence L
description binding site for residue CLA c 504
source : AP6

46) chain c
residue 114
type
sequence V
description binding site for residue CLA c 504
source : AP6

47) chain c
residue 118
type
sequence H
description binding site for residue CLA c 504
source : AP6

48) chain c
residue 63
type
sequence W
description binding site for residue CLA c 505
source : AP7

49) chain c
residue 70
type
sequence F
description binding site for residue CLA c 505
source : AP7

50) chain c
residue 84
type
sequence Q
description binding site for residue CLA c 505
source : AP7

51) chain c
residue 85
type
sequence G
description binding site for residue CLA c 505
source : AP7

52) chain c
residue 87
type
sequence I
description binding site for residue CLA c 505
source : AP7

53) chain c
residue 425
type
sequence W
description binding site for residue CLA c 505
source : AP7

54) chain c
residue 429
type
sequence S
description binding site for residue CLA c 505
source : AP7

55) chain c
residue 436
type
sequence F
description binding site for residue CLA c 505
source : AP7

56) chain c
residue 264
type
sequence F
description binding site for residue CLA c 506
source : AP8

57) chain c
residue 273
type
sequence S
description binding site for residue CLA c 506
source : AP8

58) chain c
residue 274
type
sequence Y
description binding site for residue CLA c 506
source : AP8

59) chain c
residue 277
type
sequence G
description binding site for residue CLA c 506
source : AP8

60) chain c
residue 278
type
sequence A
description binding site for residue CLA c 506
source : AP8

61) chain c
residue 441
type
sequence H
description binding site for residue CLA c 506
source : AP8

62) chain c
residue 442
type
sequence L
description binding site for residue CLA c 506
source : AP8

63) chain c
residue 445
type
sequence A
description binding site for residue CLA c 506
source : AP8

64) chain c
residue 449
type
sequence R
description binding site for residue CLA c 506
source : AP8

65) chain c
residue 161
type
sequence L
description binding site for residue CLA c 507
source : AP9

66) chain c
residue 165
type
sequence L
description binding site for residue CLA c 507
source : AP9

67) chain c
residue 213
type
sequence L
description binding site for residue CLA c 507
source : AP9

68) chain c
residue 243
type
sequence I
description binding site for residue CLA c 507
source : AP9

69) chain c
residue 247
type
sequence G
description binding site for residue CLA c 507
source : AP9

70) chain c
residue 250
type
sequence W
description binding site for residue CLA c 507
source : AP9

71) chain c
residue 251
type
sequence H
description binding site for residue CLA c 507
source : AP9

72) chain c
residue 254
type
sequence T
description binding site for residue CLA c 507
source : AP9

73) chain c
residue 255
type
sequence T
description binding site for residue CLA c 507
source : AP9

74) chain c
residue 257
type
sequence F
description binding site for residue CLA c 507
source : AP9

75) chain c
residue 259
type
sequence W
description binding site for residue CLA c 507
source : AP9

76) chain c
residue 264
type
sequence F
description binding site for residue CLA c 507
source : AP9

77) chain c
residue 157
type
sequence M
description binding site for residue CLA c 508
source : AQ1

78) chain c
residue 158
type
sequence T
description binding site for residue CLA c 508
source : AQ1

79) chain c
residue 161
type
sequence L
description binding site for residue CLA c 508
source : AQ1

80) chain c
residue 164
type
sequence H
description binding site for residue CLA c 508
source : AQ1

81) chain c
residue 168
type
sequence L
description binding site for residue CLA c 508
source : AQ1

82) chain c
residue 259
type
sequence W
description binding site for residue CLA c 508
source : AQ1

83) chain c
residue 264
type
sequence F
description binding site for residue CLA c 508
source : AQ1

84) chain c
residue 266
type
sequence W
description binding site for residue CLA c 508
source : AQ1

85) chain c
residue 271
type
sequence Y
description binding site for residue CLA c 508
source : AQ1

86) chain c
residue 274
type
sequence Y
description binding site for residue CLA c 508
source : AQ1

87) chain c
residue 275
type
sequence S
description binding site for residue CLA c 508
source : AQ1

88) chain c
residue 36
type
sequence W
description binding site for residue CLA c 509
source : AQ2

89) chain c
residue 37
type
sequence A
description binding site for residue CLA c 509
source : AQ2

90) chain c
residue 38
type
sequence G
description binding site for residue CLA c 509
source : AQ2

91) chain c
residue 39
type
sequence N
description binding site for residue CLA c 509
source : AQ2

92) chain c
residue 269
type
sequence E
description binding site for residue CLA c 509
source : AQ2

93) chain c
residue 272
type
sequence L
description binding site for residue CLA c 509
source : AQ2

94) chain c
residue 276
type
sequence L
description binding site for residue CLA c 509
source : AQ2

95) chain c
residue 436
type
sequence F
description binding site for residue CLA c 509
source : AQ2

96) chain c
residue 437
type
sequence F
description binding site for residue CLA c 509
source : AQ2

97) chain c
residue 440
type
sequence G
description binding site for residue CLA c 509
source : AQ2

98) chain c
residue 443
type
sequence W
description binding site for residue CLA c 509
source : AQ2

99) chain c
residue 444
type
sequence H
description binding site for residue CLA c 509
source : AQ2

100) chain c
residue 447
type
sequence R
description binding site for residue CLA c 509
source : AQ2

101) chain c
residue 39
type
sequence N
description binding site for residue CLA c 510
source : AQ3

102) chain c
residue 49
type
sequence L
description binding site for residue CLA c 510
source : AQ3

103) chain c
residue 52
type
sequence A
description binding site for residue CLA c 510
source : AQ3

104) chain c
residue 53
type
sequence H
description binding site for residue CLA c 510
source : AQ3

105) chain c
residue 56
type
sequence H
description binding site for residue CLA c 510
source : AQ3

106) chain c
residue 149
type
sequence Y
description binding site for residue CLA c 510
source : AQ3

107) chain c
residue 157
type
sequence M
description binding site for residue CLA c 510
source : AQ3

108) chain c
residue 160
type
sequence I
description binding site for residue CLA c 510
source : AQ3

109) chain c
residue 164
type
sequence H
description binding site for residue CLA c 510
source : AQ3

110) chain c
residue 168
type
sequence L
description binding site for residue CLA c 510
source : AQ3

111) chain c
residue 268
type
sequence G
description binding site for residue CLA c 510
source : AQ3

112) chain c
residue 269
type
sequence E
description binding site for residue CLA c 510
source : AQ3

113) chain c
residue 271
type
sequence Y
description binding site for residue CLA c 510
source : AQ3

114) chain c
residue 272
type
sequence L
description binding site for residue CLA c 510
source : AQ3

115) chain c
residue 275
type
sequence S
description binding site for residue CLA c 510
source : AQ3

116) chain c
residue 279
type
sequence L
description binding site for residue CLA c 510
source : AQ3

117) chain c
residue 39
type
sequence N
description binding site for residue CLA c 511
source : AQ4

118) chain c
residue 56
type
sequence H
description binding site for residue CLA c 511
source : AQ4

119) chain c
residue 59
type
sequence L
description binding site for residue CLA c 511
source : AQ4

120) chain c
residue 60
type
sequence I
description binding site for residue CLA c 511
source : AQ4

121) chain c
residue 63
type
sequence W
description binding site for residue CLA c 511
source : AQ4

122) chain c
residue 279
type
sequence L
description binding site for residue CLA c 511
source : AQ4

123) chain c
residue 436
type
sequence F
description binding site for residue CLA c 511
source : AQ4

124) chain c
residue 437
type
sequence F
description binding site for residue CLA c 511
source : AQ4

125) chain c
residue 25
type
sequence N
description binding site for residue CLA c 512
source : AQ5

126) chain c
residue 26
type
sequence R
description binding site for residue CLA c 512
source : AQ5

127) chain c
residue 35
type
sequence W
description binding site for residue CLA c 512
source : AQ5

128) chain c
residue 38
type
sequence G
description binding site for residue CLA c 512
source : AQ5

129) chain c
residue 39
type
sequence N
description binding site for residue CLA c 512
source : AQ5

130) chain c
residue 41
type
sequence R
description binding site for residue CLA c 512
source : AQ5

131) chain c
residue 42
type
sequence L
description binding site for residue CLA c 512
source : AQ5

132) chain c
residue 45
type
sequence L
description binding site for residue CLA c 512
source : AQ5

133) chain c
residue 48
type
sequence K
description binding site for residue CLA c 512
source : AQ5

134) chain c
residue 52
type
sequence A
description binding site for residue CLA c 512
source : AQ5

135) chain c
residue 123
type
sequence A
description binding site for residue CLA c 512
source : AQ5

136) chain c
residue 127
type
sequence F
description binding site for residue CLA c 512
source : AQ5

137) chain c
residue 134
type
sequence I
description binding site for residue CLA c 512
source : AQ5

138) chain c
residue 53
type
sequence H
description binding site for residue CLA c 513
source : AQ6

139) chain c
residue 125
type
sequence L
description binding site for residue CLA c 513
source : AQ6

140) chain c
residue 146
type
sequence F
description binding site for residue CLA c 513
source : AQ6

141) chain c
residue 147
type
sequence F
description binding site for residue CLA c 513
source : AQ6

142) chain c
residue 163
type
sequence F
description binding site for residue CLA c 513
source : AQ6

143) chain c
residue 164
type
sequence H
description binding site for residue CLA c 513
source : AQ6

144) chain c
residue 167
type
sequence V
description binding site for residue CLA c 513
source : AQ6

145) chain c
residue 170
type
sequence I
description binding site for residue CLA c 513
source : AQ6

146) chain c
residue 171
type
sequence G
description binding site for residue CLA c 513
source : AQ6

147) chain c
residue 174
type
sequence L
description binding site for residue CLA c 513
source : AQ6

148) chain c
residue 124
type
sequence V
description binding site for residue CLA c 514
source : AQ7

149) chain c
residue 128
type
sequence G
description binding site for residue CLA c 514
source : AQ7

150) chain c
residue 131
type
sequence Y
description binding site for residue CLA c 514
source : AQ7

151) chain c
residue 132
type
sequence H
description binding site for residue CLA c 514
source : AQ7

152) chain c
residue 143
type
sequence Y
description binding site for residue CLA c 514
source : AQ7

153) chain c
residue 147
type
sequence F
description binding site for residue CLA c 514
source : AQ7

154) chain c
residue 112
type
sequence F
description binding site for residue BCR c 515
source : AQ8

155) chain c
residue 116
type
sequence V
description binding site for residue BCR c 515
source : AQ8

156) chain c
residue 120
type
sequence I
description binding site for residue BCR c 515
source : AQ8

157) chain c
residue 121
type
sequence S
description binding site for residue BCR c 515
source : AQ8

158) chain c
residue 124
type
sequence V
description binding site for residue BCR c 515
source : AQ8

159) chain c
residue 125
type
sequence L
description binding site for residue BCR c 515
source : AQ8

160) chain c
residue 209
type
sequence I
description binding site for residue BCR c 516
source : AQ9

161) chain c
residue 210
type
sequence F
description binding site for residue BCR c 516
source : AQ9

162) chain c
residue 212
type
sequence Y
description binding site for residue BCR c 516
source : AQ9

163) chain c
residue 213
type
sequence L
description binding site for residue BCR c 516
source : AQ9

164) chain c
residue 227
type
sequence V
description binding site for residue BCR c 516
source : AQ9

165) chain c
residue 232
type
sequence D
description binding site for residue BCR c 516
source : AQ9

166) chain c
residue 236
type
sequence G
description binding site for residue BCR c 516
source : AQ9

167) chain c
residue 237
type
sequence H
description binding site for residue BCR c 516
source : AQ9

168) chain c
residue 217
type
sequence P
description binding site for residue DGD c 517
source : AR1

169) chain c
residue 219
type
sequence G
description binding site for residue DGD c 517
source : AR1

170) chain c
residue 220
type
sequence G
description binding site for residue DGD c 517
source : AR1

171) chain c
residue 221
type
sequence E
description binding site for residue DGD c 517
source : AR1

172) chain c
residue 222
type
sequence G
description binding site for residue DGD c 517
source : AR1

173) chain c
residue 223
type
sequence W
description binding site for residue DGD c 517
source : AR1

174) chain c
residue 225
type
sequence V
description binding site for residue DGD c 517
source : AR1

175) chain c
residue 226
type
sequence S
description binding site for residue DGD c 517
source : AR1

176) chain c
residue 227
type
sequence V
description binding site for residue DGD c 517
source : AR1

177) chain c
residue 228
type
sequence N
description binding site for residue DGD c 517
source : AR1

178) chain c
residue 284
type
sequence F
description binding site for residue DGD c 517
source : AR1

179) chain c
residue 288
type
sequence C
description binding site for residue DGD c 517
source : AR1

180) chain c
residue 292
type
sequence F
description binding site for residue DGD c 517
source : AR1

181) chain c
residue 293
type
sequence N
description binding site for residue DGD c 517
source : AR1

182) chain c
residue 294
type
sequence N
description binding site for residue DGD c 517
source : AR1

183) chain c
residue 295
type
sequence T
description binding site for residue DGD c 517
source : AR1

184) chain c
residue 360
type
sequence D
description binding site for residue DGD c 517
source : AR1

185) chain c
residue 361
type
sequence F
description binding site for residue DGD c 517
source : AR1

186) chain c
residue 362
type
sequence R
description binding site for residue DGD c 517
source : AR1

187) chain c
residue 83
type
sequence E
description binding site for residue DGD c 518
source : AR2

188) chain c
residue 84
type
sequence Q
description binding site for residue DGD c 518
source : AR2

189) chain c
residue 85
type
sequence G
description binding site for residue DGD c 518
source : AR2

190) chain c
residue 406
type
sequence S
description binding site for residue DGD c 518
source : AR2

191) chain c
residue 418
type
sequence N
description binding site for residue DGD c 518
source : AR2

192) chain c
residue 419
type
sequence F
description binding site for residue DGD c 518
source : AR2

193) chain c
residue 420
type
sequence V
description binding site for residue DGD c 518
source : AR2

194) chain c
residue 425
type
sequence W
description binding site for residue DGD c 518
source : AR2

195) chain c
residue 429
type
sequence S
description binding site for residue DGD c 518
source : AR2

196) chain c
residue 405
type
sequence N
description binding site for residue DGD c 519
source : AR3

197) chain c
residue 407
type
sequence V
description binding site for residue DGD c 519
source : AR3

198) chain c
residue 415
type
sequence N
description binding site for residue DGD c 519
source : AR3

199) chain c
residue 416
type
sequence S
description binding site for residue DGD c 519
source : AR3

200) chain c
residue 417
type
sequence V
description binding site for residue DGD c 519
source : AR3

201) chain c
residue 418
type
sequence N
description binding site for residue DGD c 519
source : AR3

202) chain c
residue 74
type
sequence H
description binding site for residue LMG c 520
source : AR4

203) chain c
residue 84
type
sequence Q
description binding site for residue LMG c 520
source : AR4

204) chain c
residue 97
type
sequence W
description binding site for residue LMG c 521
source : AR5

205) chain c
residue 107
type
sequence D
description binding site for residue LMG c 521
source : AR5

206) chain c
residue 121
type
sequence S
description binding site for residue LMG c 521
source : AR5

207) chain c
residue 55
type
sequence A
description binding site for residue BCR c 522
source : AR6

208) chain c
residue 58
type
sequence G
description binding site for residue BCR c 522
source : AR6

209) chain c
residue 59
type
sequence L
description binding site for residue BCR c 522
source : AR6

210) chain c
residue 62
type
sequence F
description binding site for residue BCR c 522
source : AR6

211) chain c
residue 119
type
sequence L
description binding site for residue BCR c 522
source : AR6

212) chain c
residue 122
type
sequence S
description binding site for residue BCR c 522
source : AR6

213) chain c
residue 123
type
sequence A
description binding site for residue BCR c 522
source : AR6

214) chain c
residue 126
type
sequence G
description binding site for residue BCR c 522
source : AR6

215) chain c
residue 62
type
sequence F
description binding site for residue BCR k 101
source : AT3

216) chain c
residue 127
type
sequence F
description binding site for residue LMG z 101
source : AT9

217) chain c
residue 131
type
sequence Y
description binding site for residue LMG z 101
source : AT9

218) chain c
residue 135
type
sequence R
description binding site for residue LMG z 101
source : AT9

219) chain c
residue 281-301
type TOPO_DOM
sequence MMGFIATCFVWFNNTVYPSEF
description Lumenal => ECO:0000269|PubMed:33846594, ECO:0007744|PDB:7NHQ
source Swiss-Prot : SWS_FT_FI1

220) chain c
residue 437-461
type TOPO_DOM
sequence FLVGHLWHAGRARAAAAGFEKGIDR
description Lumenal => ECO:0000269|PubMed:33846594, ECO:0007744|PDB:7NHQ
source Swiss-Prot : SWS_FT_FI1

221) chain c
residue 266-280
type MOD_RES
sequence WSGEAYLSYSLGALS
description N-formylmethionine => ECO:0000269|PubMed:19219048, ECO:0000269|PubMed:20558739
source Swiss-Prot : SWS_FT_FI3

222) chain c
residue 462-473
type MOD_RES
sequence ESEPVLSMPSLD
description N-formylmethionine => ECO:0000269|PubMed:19219048, ECO:0000269|PubMed:20558739
source Swiss-Prot : SWS_FT_FI3


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