eF-site ID 5e79-c
PDB Code 5e79
Chain c

click to enlarge
Title Macromolecular diffractive imaging using imperfect crystals
Classification PHOTOSYNTHESIS
Compound Photosystem II protein D1 1
Source ORGANISM_SCIENTIFIC: Thermosynechococcus elongatus (strain BP-1);
Sequence c:  ATNRDQESSGFAWWAGNARLINLSGKLLGAHVAHAGLIVF
WAGAMTLFELAHFIPEKPMYEQGLILIPHIATLGWGVGPG
GEVVDTFPFFVVGVVHLISSAVLGFGGVYHAIRGPETLEE
YSSFFGYDWKDKNKMTTILGFHLIVLGIGALLLVAKAMFF
GGLYDTWAPGGGDVRVITNPTLDPRVIFGYLLKSPFGGEG
WIVSVNNLEDVVGGHIWIGLICIAGGIWHILTTPFGWARR
AFIWSGEAYLSYSLGALSMMGFIATCFVWFNNTVYPSEFY
GPTGPEASQAQAMTFLIRDQKLGANVGSAQGPTGLGKYLM
RSPTGEIIFGGETMRFWDFRGPWLEPLRGPNGLDLNKIKN
DIQPWQERRAAEYMTHAPLGSLNSVGGVATEINSVNFVSP
RSWLATSHFVLAFFFLVGHLWHAGRARAAAAGFEKGIDRE
SEPVLSMPSLD
Description


Functional site

1) chain c
residue 354
type
sequence E
description binding site for residue OEX a 601
source : AL3

2) chain c
residue 357
type
sequence R
description binding site for residue OEX a 601
source : AL3

3) chain c
residue 353
type
sequence G
description binding site for residue CL a 604
source : AL6

4) chain c
residue 354
type
sequence E
description binding site for residue CL a 604
source : AL6

5) chain c
residue 28
type
sequence Q
description binding site for residue SQD a 612
source : AM5

6) chain c
residue 34
type
sequence A
description binding site for residue SQD a 612
source : AM5

7) chain c
residue 36
type
sequence W
description binding site for residue SQD a 612
source : AM5

8) chain c
residue 214
type
sequence L
description binding site for residue LMG a 613
source : AM6

9) chain c
residue 216
type
sequence S
description binding site for residue LMG a 613
source : AM6

10) chain c
residue 221
type
sequence E
description binding site for residue LMG a 613
source : AM6

11) chain c
residue 223
type
sequence W
description binding site for residue LMG a 613
source : AM6

12) chain c
residue 36
type
sequence W
description binding site for residue LHG a 616
source : AM9

13) chain c
residue 443
type
sequence W
description binding site for residue LHG a 616
source : AM9

14) chain c
residue 447
type
sequence R
description binding site for residue LHG a 616
source : AM9

15) chain c
residue 95
type
sequence L
description binding site for residue CLA c 501
source : AP5

16) chain c
residue 168
type
sequence L
description binding site for residue CLA c 501
source : AP5

17) chain c
residue 171
type
sequence G
description binding site for residue CLA c 501
source : AP5

18) chain c
residue 172
type
sequence A
description binding site for residue CLA c 501
source : AP5

19) chain c
residue 175
type
sequence L
description binding site for residue CLA c 501
source : AP5

20) chain c
residue 185
type
sequence L
description binding site for residue CLA c 501
source : AP5

21) chain c
residue 233
type
sequence V
description binding site for residue CLA c 501
source : AP5

22) chain c
residue 237
type
sequence H
description binding site for residue CLA c 501
source : AP5

23) chain c
residue 240
type
sequence I
description binding site for residue CLA c 501
source : AP5

24) chain c
residue 282
type
sequence M
description binding site for residue CLA c 501
source : AP5

25) chain c
residue 285
type
sequence I
description binding site for residue CLA c 501
source : AP5

26) chain c
residue 289
type
sequence F
description binding site for residue CLA c 501
source : AP5

27) chain c
residue 297
type
sequence Y
description binding site for residue CLA c 501
source : AP5

28) chain c
residue 63
type
sequence W
description binding site for residue CLA c 502
source : AP6

29) chain c
residue 91
type
sequence H
description binding site for residue CLA c 502
source : AP6

30) chain c
residue 178
type
sequence K
description binding site for residue CLA c 502
source : AP6

31) chain c
residue 182
type
sequence F
description binding site for residue CLA c 502
source : AP6

32) chain c
residue 279
type
sequence L
description binding site for residue CLA c 502
source : AP6

33) chain c
residue 282
type
sequence M
description binding site for residue CLA c 502
source : AP6

34) chain c
residue 286
type
sequence A
description binding site for residue CLA c 502
source : AP6

35) chain c
residue 297
type
sequence Y
description binding site for residue CLA c 502
source : AP6

36) chain c
residue 430
type
sequence H
description binding site for residue CLA c 502
source : AP6

37) chain c
residue 433
type
sequence L
description binding site for residue CLA c 502
source : AP6

38) chain c
residue 437
type
sequence F
description binding site for residue CLA c 502
source : AP6

39) chain c
residue 60
type
sequence I
description binding site for residue CLA c 503
source : AP7

40) chain c
residue 61
type
sequence V
description binding site for residue CLA c 503
source : AP7

41) chain c
residue 68
type
sequence T
description binding site for residue CLA c 503
source : AP7

42) chain c
residue 88
type
sequence L
description binding site for residue CLA c 503
source : AP7

43) chain c
residue 91
type
sequence H
description binding site for residue CLA c 503
source : AP7

44) chain c
residue 92
type
sequence I
description binding site for residue CLA c 503
source : AP7

45) chain c
residue 95
type
sequence L
description binding site for residue CLA c 503
source : AP7

46) chain c
residue 114
type
sequence V
description binding site for residue CLA c 503
source : AP7

47) chain c
residue 118
type
sequence H
description binding site for residue CLA c 503
source : AP7

48) chain c
residue 63
type
sequence W
description binding site for residue CLA c 504
source : AP8

49) chain c
residue 70
type
sequence F
description binding site for residue CLA c 504
source : AP8

50) chain c
residue 84
type
sequence Q
description binding site for residue CLA c 504
source : AP8

51) chain c
residue 85
type
sequence G
description binding site for residue CLA c 504
source : AP8

52) chain c
residue 87
type
sequence I
description binding site for residue CLA c 504
source : AP8

53) chain c
residue 425
type
sequence W
description binding site for residue CLA c 504
source : AP8

54) chain c
residue 429
type
sequence S
description binding site for residue CLA c 504
source : AP8

55) chain c
residue 436
type
sequence F
description binding site for residue CLA c 504
source : AP8

56) chain c
residue 264
type
sequence F
description binding site for residue CLA c 505
source : AP9

57) chain c
residue 273
type
sequence S
description binding site for residue CLA c 505
source : AP9

58) chain c
residue 274
type
sequence Y
description binding site for residue CLA c 505
source : AP9

59) chain c
residue 277
type
sequence G
description binding site for residue CLA c 505
source : AP9

60) chain c
residue 278
type
sequence A
description binding site for residue CLA c 505
source : AP9

61) chain c
residue 438
type
sequence L
description binding site for residue CLA c 505
source : AP9

62) chain c
residue 441
type
sequence H
description binding site for residue CLA c 505
source : AP9

63) chain c
residue 442
type
sequence L
description binding site for residue CLA c 505
source : AP9

64) chain c
residue 445
type
sequence A
description binding site for residue CLA c 505
source : AP9

65) chain c
residue 449
type
sequence R
description binding site for residue CLA c 505
source : AP9

66) chain c
residue 161
type
sequence L
description binding site for residue CLA c 506
source : AQ1

67) chain c
residue 165
type
sequence L
description binding site for residue CLA c 506
source : AQ1

68) chain c
residue 213
type
sequence L
description binding site for residue CLA c 506
source : AQ1

69) chain c
residue 214
type
sequence L
description binding site for residue CLA c 506
source : AQ1

70) chain c
residue 243
type
sequence I
description binding site for residue CLA c 506
source : AQ1

71) chain c
residue 247
type
sequence G
description binding site for residue CLA c 506
source : AQ1

72) chain c
residue 250
type
sequence W
description binding site for residue CLA c 506
source : AQ1

73) chain c
residue 251
type
sequence H
description binding site for residue CLA c 506
source : AQ1

74) chain c
residue 254
type
sequence T
description binding site for residue CLA c 506
source : AQ1

75) chain c
residue 255
type
sequence T
description binding site for residue CLA c 506
source : AQ1

76) chain c
residue 256
type
sequence P
description binding site for residue CLA c 506
source : AQ1

77) chain c
residue 257
type
sequence F
description binding site for residue CLA c 506
source : AQ1

78) chain c
residue 259
type
sequence W
description binding site for residue CLA c 506
source : AQ1

79) chain c
residue 161
type
sequence L
description binding site for residue CLA c 507
source : AQ2

80) chain c
residue 164
type
sequence H
description binding site for residue CLA c 507
source : AQ2

81) chain c
residue 168
type
sequence L
description binding site for residue CLA c 507
source : AQ2

82) chain c
residue 259
type
sequence W
description binding site for residue CLA c 507
source : AQ2

83) chain c
residue 266
type
sequence W
description binding site for residue CLA c 507
source : AQ2

84) chain c
residue 271
type
sequence Y
description binding site for residue CLA c 507
source : AQ2

85) chain c
residue 274
type
sequence Y
description binding site for residue CLA c 507
source : AQ2

86) chain c
residue 275
type
sequence S
description binding site for residue CLA c 507
source : AQ2

87) chain c
residue 279
type
sequence L
description binding site for residue CLA c 507
source : AQ2

88) chain c
residue 282
type
sequence M
description binding site for residue CLA c 507
source : AQ2

89) chain c
residue 36
type
sequence W
description binding site for residue CLA c 508
source : AQ3

90) chain c
residue 37
type
sequence A
description binding site for residue CLA c 508
source : AQ3

91) chain c
residue 38
type
sequence G
description binding site for residue CLA c 508
source : AQ3

92) chain c
residue 39
type
sequence N
description binding site for residue CLA c 508
source : AQ3

93) chain c
residue 269
type
sequence E
description binding site for residue CLA c 508
source : AQ3

94) chain c
residue 272
type
sequence L
description binding site for residue CLA c 508
source : AQ3

95) chain c
residue 276
type
sequence L
description binding site for residue CLA c 508
source : AQ3

96) chain c
residue 436
type
sequence F
description binding site for residue CLA c 508
source : AQ3

97) chain c
residue 437
type
sequence F
description binding site for residue CLA c 508
source : AQ3

98) chain c
residue 440
type
sequence G
description binding site for residue CLA c 508
source : AQ3

99) chain c
residue 443
type
sequence W
description binding site for residue CLA c 508
source : AQ3

100) chain c
residue 444
type
sequence H
description binding site for residue CLA c 508
source : AQ3

101) chain c
residue 447
type
sequence R
description binding site for residue CLA c 508
source : AQ3

102) chain c
residue 39
type
sequence N
description binding site for residue CLA c 509
source : AQ4

103) chain c
residue 49
type
sequence L
description binding site for residue CLA c 509
source : AQ4

104) chain c
residue 52
type
sequence A
description binding site for residue CLA c 509
source : AQ4

105) chain c
residue 53
type
sequence H
description binding site for residue CLA c 509
source : AQ4

106) chain c
residue 56
type
sequence H
description binding site for residue CLA c 509
source : AQ4

107) chain c
residue 157
type
sequence M
description binding site for residue CLA c 509
source : AQ4

108) chain c
residue 160
type
sequence I
description binding site for residue CLA c 509
source : AQ4

109) chain c
residue 268
type
sequence G
description binding site for residue CLA c 509
source : AQ4

110) chain c
residue 269
type
sequence E
description binding site for residue CLA c 509
source : AQ4

111) chain c
residue 271
type
sequence Y
description binding site for residue CLA c 509
source : AQ4

112) chain c
residue 272
type
sequence L
description binding site for residue CLA c 509
source : AQ4

113) chain c
residue 275
type
sequence S
description binding site for residue CLA c 509
source : AQ4

114) chain c
residue 39
type
sequence N
description binding site for residue CLA c 510
source : AQ5

115) chain c
residue 56
type
sequence H
description binding site for residue CLA c 510
source : AQ5

116) chain c
residue 59
type
sequence L
description binding site for residue CLA c 510
source : AQ5

117) chain c
residue 60
type
sequence I
description binding site for residue CLA c 510
source : AQ5

118) chain c
residue 63
type
sequence W
description binding site for residue CLA c 510
source : AQ5

119) chain c
residue 279
type
sequence L
description binding site for residue CLA c 510
source : AQ5

120) chain c
residue 436
type
sequence F
description binding site for residue CLA c 510
source : AQ5

121) chain c
residue 437
type
sequence F
description binding site for residue CLA c 510
source : AQ5

122) chain c
residue 26
type
sequence R
description binding site for residue CLA c 511
source : AQ6

123) chain c
residue 35
type
sequence W
description binding site for residue CLA c 511
source : AQ6

124) chain c
residue 38
type
sequence G
description binding site for residue CLA c 511
source : AQ6

125) chain c
residue 39
type
sequence N
description binding site for residue CLA c 511
source : AQ6

126) chain c
residue 41
type
sequence R
description binding site for residue CLA c 511
source : AQ6

127) chain c
residue 42
type
sequence L
description binding site for residue CLA c 511
source : AQ6

128) chain c
residue 45
type
sequence L
description binding site for residue CLA c 511
source : AQ6

129) chain c
residue 48
type
sequence K
description binding site for residue CLA c 511
source : AQ6

130) chain c
residue 52
type
sequence A
description binding site for residue CLA c 511
source : AQ6

131) chain c
residue 123
type
sequence A
description binding site for residue CLA c 511
source : AQ6

132) chain c
residue 127
type
sequence F
description binding site for residue CLA c 511
source : AQ6

133) chain c
residue 134
type
sequence I
description binding site for residue CLA c 511
source : AQ6

134) chain c
residue 50
type
sequence L
description binding site for residue CLA c 512
source : AQ7

135) chain c
residue 53
type
sequence H
description binding site for residue CLA c 512
source : AQ7

136) chain c
residue 125
type
sequence L
description binding site for residue CLA c 512
source : AQ7

137) chain c
residue 146
type
sequence F
description binding site for residue CLA c 512
source : AQ7

138) chain c
residue 147
type
sequence F
description binding site for residue CLA c 512
source : AQ7

139) chain c
residue 163
type
sequence F
description binding site for residue CLA c 512
source : AQ7

140) chain c
residue 164
type
sequence H
description binding site for residue CLA c 512
source : AQ7

141) chain c
residue 166
type
sequence I
description binding site for residue CLA c 512
source : AQ7

142) chain c
residue 167
type
sequence V
description binding site for residue CLA c 512
source : AQ7

143) chain c
residue 170
type
sequence I
description binding site for residue CLA c 512
source : AQ7

144) chain c
residue 171
type
sequence G
description binding site for residue CLA c 512
source : AQ7

145) chain c
residue 124
type
sequence V
description binding site for residue CLA c 513
source : AQ8

146) chain c
residue 128
type
sequence G
description binding site for residue CLA c 513
source : AQ8

147) chain c
residue 131
type
sequence Y
description binding site for residue CLA c 513
source : AQ8

148) chain c
residue 132
type
sequence H
description binding site for residue CLA c 513
source : AQ8

149) chain c
residue 143
type
sequence Y
description binding site for residue CLA c 513
source : AQ8

150) chain c
residue 147
type
sequence F
description binding site for residue CLA c 513
source : AQ8

151) chain c
residue 112
type
sequence F
description binding site for residue BCR c 514
source : AQ9

152) chain c
residue 116
type
sequence V
description binding site for residue BCR c 514
source : AQ9

153) chain c
residue 121
type
sequence S
description binding site for residue BCR c 514
source : AQ9

154) chain c
residue 124
type
sequence V
description binding site for residue BCR c 514
source : AQ9

155) chain c
residue 125
type
sequence L
description binding site for residue BCR c 514
source : AQ9

156) chain c
residue 209
type
sequence I
description binding site for residue BCR c 515
source : AR1

157) chain c
residue 210
type
sequence F
description binding site for residue BCR c 515
source : AR1

158) chain c
residue 212
type
sequence Y
description binding site for residue BCR c 515
source : AR1

159) chain c
residue 213
type
sequence L
description binding site for residue BCR c 515
source : AR1

160) chain c
residue 232
type
sequence D
description binding site for residue BCR c 515
source : AR1

161) chain c
residue 236
type
sequence G
description binding site for residue BCR c 515
source : AR1

162) chain c
residue 237
type
sequence H
description binding site for residue BCR c 515
source : AR1

163) chain c
residue 217
type
sequence P
description binding site for residue DGD c 516
source : AR2

164) chain c
residue 219
type
sequence G
description binding site for residue DGD c 516
source : AR2

165) chain c
residue 220
type
sequence G
description binding site for residue DGD c 516
source : AR2

166) chain c
residue 221
type
sequence E
description binding site for residue DGD c 516
source : AR2

167) chain c
residue 222
type
sequence G
description binding site for residue DGD c 516
source : AR2

168) chain c
residue 223
type
sequence W
description binding site for residue DGD c 516
source : AR2

169) chain c
residue 226
type
sequence S
description binding site for residue DGD c 516
source : AR2

170) chain c
residue 227
type
sequence V
description binding site for residue DGD c 516
source : AR2

171) chain c
residue 228
type
sequence N
description binding site for residue DGD c 516
source : AR2

172) chain c
residue 288
type
sequence C
description binding site for residue DGD c 516
source : AR2

173) chain c
residue 292
type
sequence F
description binding site for residue DGD c 516
source : AR2

174) chain c
residue 293
type
sequence N
description binding site for residue DGD c 516
source : AR2

175) chain c
residue 294
type
sequence N
description binding site for residue DGD c 516
source : AR2

176) chain c
residue 295
type
sequence T
description binding site for residue DGD c 516
source : AR2

177) chain c
residue 360
type
sequence D
description binding site for residue DGD c 516
source : AR2

178) chain c
residue 361
type
sequence F
description binding site for residue DGD c 516
source : AR2

179) chain c
residue 362
type
sequence R
description binding site for residue DGD c 516
source : AR2

180) chain c
residue 438
type
sequence L
description binding site for residue DGD c 516
source : AR2

181) chain c
residue 83
type
sequence E
description binding site for residue DGD c 517
source : AR3

182) chain c
residue 84
type
sequence Q
description binding site for residue DGD c 517
source : AR3

183) chain c
residue 85
type
sequence G
description binding site for residue DGD c 517
source : AR3

184) chain c
residue 406
type
sequence S
description binding site for residue DGD c 517
source : AR3

185) chain c
residue 418
type
sequence N
description binding site for residue DGD c 517
source : AR3

186) chain c
residue 419
type
sequence F
description binding site for residue DGD c 517
source : AR3

187) chain c
residue 420
type
sequence V
description binding site for residue DGD c 517
source : AR3

188) chain c
residue 425
type
sequence W
description binding site for residue DGD c 517
source : AR3

189) chain c
residue 428
type
sequence T
description binding site for residue DGD c 517
source : AR3

190) chain c
residue 429
type
sequence S
description binding site for residue DGD c 517
source : AR3

191) chain c
residue 405
type
sequence N
description binding site for residue DGD c 518
source : AR4

192) chain c
residue 407
type
sequence V
description binding site for residue DGD c 518
source : AR4

193) chain c
residue 415
type
sequence N
description binding site for residue DGD c 518
source : AR4

194) chain c
residue 416
type
sequence S
description binding site for residue DGD c 518
source : AR4

195) chain c
residue 417
type
sequence V
description binding site for residue DGD c 518
source : AR4

196) chain c
residue 418
type
sequence N
description binding site for residue DGD c 518
source : AR4

197) chain c
residue 74
type
sequence H
description binding site for residue LMG c 519
source : AR5

198) chain c
residue 84
type
sequence Q
description binding site for residue LMG c 519
source : AR5

199) chain c
residue 97
type
sequence W
description binding site for residue LMG c 520
source : AR6

200) chain c
residue 107
type
sequence D
description binding site for residue LMG c 520
source : AR6

201) chain c
residue 113
type
sequence V
description binding site for residue LMG c 520
source : AR6

202) chain c
residue 117
type
sequence V
description binding site for residue LMG c 520
source : AR6

203) chain c
residue 118
type
sequence H
description binding site for residue LMG c 520
source : AR6

204) chain c
residue 121
type
sequence S
description binding site for residue LMG c 520
source : AR6

205) chain c
residue 55
type
sequence A
description binding site for residue BCR c 521
source : AR7

206) chain c
residue 58
type
sequence G
description binding site for residue BCR c 521
source : AR7

207) chain c
residue 59
type
sequence L
description binding site for residue BCR c 521
source : AR7

208) chain c
residue 62
type
sequence F
description binding site for residue BCR c 521
source : AR7

209) chain c
residue 119
type
sequence L
description binding site for residue BCR c 521
source : AR7

210) chain c
residue 122
type
sequence S
description binding site for residue BCR c 521
source : AR7

211) chain c
residue 123
type
sequence A
description binding site for residue BCR c 521
source : AR7

212) chain c
residue 126
type
sequence G
description binding site for residue BCR c 521
source : AR7

213) chain c
residue 393
type
sequence A
description binding site for residue HEM v 201
source : AU1

214) chain c
residue 127
type
sequence F
description binding site for residue LMG z 101
source : AU3

215) chain c
residue 131
type
sequence Y
description binding site for residue LMG z 101
source : AU3

216) chain c
residue 135
type
sequence R
description binding site for residue LMG z 101
source : AU3

217) chain c
residue 281-301
type TOPO_DOM
sequence MMGFIATCFVWFNNTVYPSEF
description Lumenal
source Swiss-Prot : SWS_FT_FI1

218) chain c
residue 437-461
type TOPO_DOM
sequence FLVGHLWHAGRARAAAAGFEKGIDR
description Lumenal
source Swiss-Prot : SWS_FT_FI1

219) chain c
residue 266-280
type TOPO_DOM
sequence WSGEAYLSYSLGALS
description Cytoplasmic => ECO:0000269|PubMed:33846594, ECO:0007744|PDB:7NHQ
source Swiss-Prot : SWS_FT_FI3

220) chain c
residue 462-473
type TOPO_DOM
sequence ESEPVLSMPSLD
description Cytoplasmic => ECO:0000269|PubMed:33846594, ECO:0007744|PDB:7NHQ
source Swiss-Prot : SWS_FT_FI3


Display surface

Download
Links