eF-site ID 5e6d-AB
PDB Code 5e6d
Chain A, B

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Title Glucocorticoid receptor DNA binding domain - ICAM1 NF-kB response element complex
Classification dna binding protein/dna
Compound DNA (5'-D(*GP*CP*TP*CP*CP*GP*GP*AP*AP*TP*TP*TP*CP*CP*AP*A)-3')
Source (GCR_HUMAN)
Sequence A:  PKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLC
AGRNDCIIDKIRRKNCPACRYRKCLQAGMNLEA
B:  KLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCA
GRNDCIIDKIRRKNCPACRYRKCLQAGMNLEA
Description


Functional site

1) chain A
residue 421
type
sequence C
description binding site for residue ZN A 601
source : AC1

2) chain A
residue 424
type
sequence C
description binding site for residue ZN A 601
source : AC1

3) chain A
residue 438
type
sequence C
description binding site for residue ZN A 601
source : AC1

4) chain A
residue 441
type
sequence C
description binding site for residue ZN A 601
source : AC1

5) chain A
residue 457
type
sequence C
description binding site for residue ZN A 602
source : AC2

6) chain A
residue 463
type
sequence C
description binding site for residue ZN A 602
source : AC2

7) chain A
residue 473
type
sequence C
description binding site for residue ZN A 602
source : AC2

8) chain A
residue 476
type
sequence C
description binding site for residue ZN A 602
source : AC2

9) chain B
residue 457
type
sequence C
description binding site for residue ZN B 601
source : AC3

10) chain B
residue 463
type
sequence C
description binding site for residue ZN B 601
source : AC3

11) chain B
residue 473
type
sequence C
description binding site for residue ZN B 601
source : AC3

12) chain B
residue 476
type
sequence C
description binding site for residue ZN B 601
source : AC3

13) chain B
residue 421
type
sequence C
description binding site for residue ZN B 602
source : AC4

14) chain B
residue 424
type
sequence C
description binding site for residue ZN B 602
source : AC4

15) chain B
residue 438
type
sequence C
description binding site for residue ZN B 602
source : AC4

16) chain B
residue 441
type
sequence C
description binding site for residue ZN B 602
source : AC4

17) chain A
residue 445
type CROSSLNK
sequence F
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P06537
source Swiss-Prot : SWS_FT_FI4

18) chain B
residue 445
type CROSSLNK
sequence F
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P06537
source Swiss-Prot : SWS_FT_FI4

19) chain A
residue 421-447
type prosite
sequence CLVCSDEASGCHYGVLTCGSCKVFFKR
description NUCLEAR_REC_DBD_1 Nuclear hormones receptors DNA-binding region signature. ClvCs.Deasgc.HYgvltCgsCkvFFkR
source prosite : PS00031

20) chain A
residue 447-467
type ZN_FING
sequence RAVEGQHNYLCAGRNDCIIDK
description NR C4-type => ECO:0000255|PROSITE-ProRule:PRU00407
source Swiss-Prot : SWS_FT_FI1

21) chain B
residue 447-467
type ZN_FING
sequence RAVEGQHNYLCAGRNDCIIDK
description NR C4-type => ECO:0000255|PROSITE-ProRule:PRU00407
source Swiss-Prot : SWS_FT_FI1

22) chain A
residue 430
type MOD_RES
sequence G
description Phosphoserine; by GSK3-beta => ECO:0000269|PubMed:18838540
source Swiss-Prot : SWS_FT_FI2

23) chain B
residue 430
type MOD_RES
sequence G
description Phosphoserine; by GSK3-beta => ECO:0000269|PubMed:18838540
source Swiss-Prot : SWS_FT_FI2


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