eF-site ID 5e3c-A
PDB Code 5e3c
Chain A

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Title Structure of human DPP3 in complex with hemorphin like opioid peptide IVYPW
Classification HYDROLASE
Compound Dipeptidyl peptidase 3
Source Homo sapiens (Human) (5E3C)
Sequence A:  DTQYILPNDIGVSSLDSREAFRLLSPTERLYAYHLSRAAW
YGGLAVLLQTSPEAPYIYALLSRLFRAQDPDQLRQHALAE
GLTEEEYQAFLVYAAGVYSNMGNYKSFGDTKFVPNLPKEK
LERVILGSEAAQQHPEEVRGLWQTCGELMFSLEPRLRHLG
LGKEGITTYFSGNCTMEDAKLAQDFLDSQNLSAYNTRLFK
EVDGCGKPYYEVRLASVLGSEPSLDSEVTSKLKSYEFRGS
PFQVTRGDYAPILQKVVEQLEKAKAYAANSHQGQMLAQYI
ESFTQGSIEAHKRGSRFWIQDKGPIVESYIGFIESYRDPF
GSRGEFEGFVAVVNKAMSAKFERLVASAEQLLKELPWPPT
FEKDKFLTPDFTSLDVLTFAGSGIPAGINIPNYDDLRQTE
GFKNVSLGNVLAVAYATQREKLTFLEEDDKDLYILWKGPS
FDVQVGLHALLGHGSGKLFVQDEKGAFNFDQETVINPETG
EQIQSWYRCGETWDSKFSTIASSYEECRAESVGLYLSLHP
QVLEIFGFEGADAEDVIYVNWLNMVRAGLLALEFYTPEAF
NWRQAHMQARFVILRVLLEAGEGLVTITPTTGSDGRPDAR
VRLDRSKIRSVGKPALERFLRRLQVLKSTGDVAGGRALYE
GYATVTDAPPESFLTLRDTVLLRKESRKLIVQPNTRLEGS
DVQLLEYEASAAGLIRSFSERFPEDGPELEEILTQLATAD
ARFW
Description


Functional site

1) chain A
residue 450
type
sequence H
description binding site for residue ZN A 801
source : AC1

2) chain A
residue 455
type
sequence H
description binding site for residue ZN A 801
source : AC1

3) chain A
residue 508
type
sequence E
description binding site for residue ZN A 801
source : AC1

4) chain A
residue 162
type
sequence G
description binding site for residue MG A 802
source : AC2

5) chain A
residue 164
type
sequence G
description binding site for residue MG A 802
source : AC2

6) chain A
residue 167
type
sequence G
description binding site for residue MG A 802
source : AC2

7) chain A
residue 317
type
sequence S
description binding site for residue K A 803
source : AC3

8) chain A
residue 323
type
sequence G
description binding site for residue K A 803
source : AC3

9) chain A
residue 496
type
sequence D
description binding site for residue K A 803
source : AC3

10) chain A
residue 504
type
sequence S
description binding site for residue K A 803
source : AC3

11) chain A
residue 101
type
sequence S
description binding site for residue MG A 804
source : AC4

12) chain A
residue 102
type
sequence N
description binding site for residue MG A 804
source : AC4

13) chain A
residue 108
type
sequence S
description binding site for residue MG A 804
source : AC4

14) chain A
residue 384
type
sequence S
description binding site for residue MG A 804
source : AC4

15) chain A
residue 451
type ACT_SITE
sequence A
description ACT_SITE => ECO:0000250|UniProtKB:O55096
source Swiss-Prot : SWS_FT_FI1

16) chain A
residue 450
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:22493238, ECO:0007744|PDB:3FVY
source Swiss-Prot : SWS_FT_FI2

17) chain A
residue 455
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:22493238, ECO:0007744|PDB:3FVY
source Swiss-Prot : SWS_FT_FI2

18) chain A
residue 508
type BINDING
sequence E
description BINDING => ECO:0000269|PubMed:22493238, ECO:0007744|PDB:3FVY
source Swiss-Prot : SWS_FT_FI2


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