eF-site ID 5dny-D
PDB Code 5dny
Chain D

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Title Structure of the ATPrS-Mre11/Rad50-DNA complex
Classification RECOMBINATION/DNA
Compound DNA double-strand break repair protein Mre11
Source Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii) (5DNY)
Sequence D:  MSMILKEIRMNNFKSHVNSRIKFEKGIVAIIGENGSGKSS
IFEAVFFALFGAGSNFNYDTIITKGKKSVYVELDFEVNGN
NYKIIREYDSGRGGAKLYKNGKPYATTISAVNKAVNEILG
VDRNMFLNSIYIKQGEIAKFLSLKPSEKLETVAKLLGIDE
FEKCYQKMGEIVKEYEKRLERIEGELNYNLEKEKEKLTKF
VEYLDKVRRIFGRNGFQAYLREKYVPLIQKYLNEAFSEFD
LPYSFVELTKDFEVRVHAPNGVLTIDNLSGGEQIAVALSL
RLAIANALIGNRVECIILDEPTVYLDENRRAKLAEIFRKV
KSIPQMIIITHHRELEDVADVIINVKKDGNVSKVKING
Description


Functional site

1) chain D
residue 890
type
sequence Y
description binding site for residue AGS B 1101
source : AC3

2) chain D
residue 910
type
sequence L
description binding site for residue AGS B 1101
source : AC3

3) chain D
residue 914
type
sequence N
description binding site for residue AGS B 1101
source : AC3

4) chain D
residue 916
type
sequence S
description binding site for residue AGS B 1101
source : AC3

5) chain D
residue 919
type
sequence E
description binding site for residue AGS B 1101
source : AC3

6) chain D
residue 14
type
sequence K
description binding site for residue AGS D 1101
source : AC6

7) chain D
residue 15
type
sequence S
description binding site for residue AGS D 1101
source : AC6

8) chain D
residue 33
type
sequence E
description binding site for residue AGS D 1101
source : AC6

9) chain D
residue 35
type
sequence G
description binding site for residue AGS D 1101
source : AC6

10) chain D
residue 36
type
sequence S
description binding site for residue AGS D 1101
source : AC6

11) chain D
residue 37
type
sequence G
description binding site for residue AGS D 1101
source : AC6

12) chain D
residue 38
type
sequence K
description binding site for residue AGS D 1101
source : AC6

13) chain D
residue 39
type
sequence S
description binding site for residue AGS D 1101
source : AC6

14) chain D
residue 40
type
sequence S
description binding site for residue AGS D 1101
source : AC6

15) chain D
residue 60
type
sequence T
description binding site for residue AGS D 1101
source : AC6

16) chain D
residue 62
type
sequence I
description binding site for residue AGS D 1101
source : AC6

17) chain D
residue 63
type
sequence T
description binding site for residue AGS D 1101
source : AC6

18) chain D
residue 64
type
sequence K
description binding site for residue AGS D 1101
source : AC6

19) chain D
residue 134
type
sequence Q
description binding site for residue AGS D 1101
source : AC6

20) chain D
residue 946
type
sequence D
description binding site for residue AGS D 1101
source : AC6

21) chain D
residue 947
type
sequence E
description binding site for residue AGS D 1101
source : AC6

22) chain D
residue 994
type
sequence K
description binding site for residue AGS D 1101
source : AC6

23) chain D
residue 14
type BINDING
sequence K
description BINDING => ECO:0000255|HAMAP-Rule:MF_00449, ECO:0007744|PDB:3AUY
source Swiss-Prot : SWS_FT_FI1

24) chain D
residue 35
type BINDING
sequence G
description BINDING => ECO:0007744|PDB:3AUX, ECO:0007744|PDB:3AUY
source Swiss-Prot : SWS_FT_FI2

25) chain D
residue 62
type BINDING
sequence I
description BINDING => ECO:0007744|PDB:3AUX, ECO:0007744|PDB:3AUY
source Swiss-Prot : SWS_FT_FI2

26) chain D
residue 134
type BINDING
sequence Q
description BINDING => ECO:0000255|HAMAP-Rule:MF_00449
source Swiss-Prot : SWS_FT_FI3


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