eF-site ID 5dn9-A
PDB Code 5dn9
Chain A

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Title Crystal structure of Candida boidinii formate dehydrogenase complexed with NAD+ and azide
Classification OXIDOREDUCTASE
Compound FDH
Source (A0A0A1EQY0_CANBO)
Sequence A:  MKIVLVLYDAGKHAADEEKLYGCTENKLGIANWLKDQGHE
LITTSDKEGGNSVLDQHIPDADIIITTPFHPAYITKERID
KAKKLKLVVVAGVGSDHIDLDYINQTGKKISVLEVTGSNV
VSVAEHVLMTMLVLVRNFVPAHEQIINHDWEVAAIAKDAY
DIEGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALP
KDAEEKVGARRVENIEELVAQADIVTINAPLHAGTKGLIN
KELLSKFKKGAWLVNTARGAICVAEDVAAALESGQLRGYG
GDVWFPQPAPKDHPWRDMRNKYGAGNAMTPHYSGTTLDAQ
TRYAEGTKNILESFFTGKFDYRPQDIILLNGEYITKAYGK
H
Description


Functional site

1) chain A
residue 69
type
sequence F
description binding site for residue NAD A 501
source : AC1

2) chain A
residue 93
type
sequence V
description binding site for residue NAD A 501
source : AC1

3) chain A
residue 119
type
sequence N
description binding site for residue NAD A 501
source : AC1

4) chain A
residue 120
type
sequence V
description binding site for residue NAD A 501
source : AC1

5) chain A
residue 123
type
sequence V
description binding site for residue NAD A 501
source : AC1

6) chain A
residue 171
type
sequence G
description binding site for residue NAD A 501
source : AC1

7) chain A
residue 173
type
sequence G
description binding site for residue NAD A 501
source : AC1

8) chain A
residue 174
type
sequence R
description binding site for residue NAD A 501
source : AC1

9) chain A
residue 175
type
sequence I
description binding site for residue NAD A 501
source : AC1

10) chain A
residue 194
type
sequence Y
description binding site for residue NAD A 501
source : AC1

11) chain A
residue 195
type
sequence D
description binding site for residue NAD A 501
source : AC1

12) chain A
residue 196
type
sequence Y
description binding site for residue NAD A 501
source : AC1

13) chain A
residue 229
type
sequence A
description binding site for residue NAD A 501
source : AC1

14) chain A
residue 230
type
sequence P
description binding site for residue NAD A 501
source : AC1

15) chain A
residue 232
type
sequence H
description binding site for residue NAD A 501
source : AC1

16) chain A
residue 235
type
sequence T
description binding site for residue NAD A 501
source : AC1

17) chain A
residue 256
type
sequence T
description binding site for residue NAD A 501
source : AC1

18) chain A
residue 257
type
sequence A
description binding site for residue NAD A 501
source : AC1

19) chain A
residue 258
type
sequence R
description binding site for residue NAD A 501
source : AC1

20) chain A
residue 282
type
sequence D
description binding site for residue NAD A 501
source : AC1

21) chain A
residue 283
type
sequence V
description binding site for residue NAD A 501
source : AC1

22) chain A
residue 311
type
sequence H
description binding site for residue NAD A 501
source : AC1

23) chain A
residue 313
type
sequence S
description binding site for residue NAD A 501
source : AC1

24) chain A
residue 314
type
sequence G
description binding site for residue NAD A 501
source : AC1

25) chain A
residue 357
type
sequence A
description binding site for residue NAD A 501
source : AC1

26) chain A
residue 68
type
sequence P
description binding site for residue AZI A 502
source : AC2

27) chain A
residue 69
type
sequence F
description binding site for residue AZI A 502
source : AC2

28) chain A
residue 92
type
sequence G
description binding site for residue AZI A 502
source : AC2

29) chain A
residue 93
type
sequence V
description binding site for residue AZI A 502
source : AC2

30) chain A
residue 119
type
sequence N
description binding site for residue AZI A 502
source : AC2

31) chain A
residue 258
type
sequence R
description binding site for residue AZI A 502
source : AC2

32) chain A
residue 311
type
sequence H
description binding site for residue AZI A 502
source : AC2

33) chain A
residue 232
type
sequence H
description binding site for residue CL A 503
source : AC3

34) chain A
residue 167-195
type prosite
sequence IATIGAGRIGYRVLERLVPFNPKELLYYD
description D_2_HYDROXYACID_DH_1 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. IATIGaGRIGyrvlerlvpfnpkeLLyYD
source prosite : PS00065

35) chain A
residue 218-240
type prosite
sequence LVAQADIVTINAPLHAGTKGLIN
description D_2_HYDROXYACID_DH_2 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. LVaqADIVtINaPlhagTkgLiN
source prosite : PS00670

36) chain A
residue 247-263
type prosite
sequence FKKGAWLVNTARGAICV
description D_2_HYDROXYACID_DH_3 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. FKkGaWLVNtARGaICV
source prosite : PS00671


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