eF-site ID 5dkh-ABC
PDB Code 5dkh
Chain A, B, C

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Title Crystal structure of the bromodomain of human BRM (SMARCA2) in complex with a hydroxyphenyl propenone inhibitor 17
Classification TRANSCRIPTION
Compound Probable global transcription activator SNF2L2
Source Homo sapiens (Human) (SMCA2_HUMAN)
Sequence A:  SPNPPKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRK
ELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLL
CHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEE
B:  PKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPE
YYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNA
QTFNLEGSQIYEDSIVLQSVFKSARQKIAK
C:  PPKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELP
EYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHN
AQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEE
Description


Functional site

1) chain A
residue 1441
type
sequence H
description binding site for residue ZN A 1501
source : AC1

2) chain A
residue 1458
type
sequence H
description binding site for residue ZN A 1501
source : AC1

3) chain A
residue 1439
type
sequence R
description binding site for residue ZN A 1502
source : AC2

4) chain A
residue 1441
type
sequence H
description binding site for residue ZN A 1502
source : AC2

5) chain A
residue 1458
type
sequence H
description binding site for residue ZN A 1502
source : AC2

6) chain A
residue 1408
type
sequence V
description binding site for residue 5C0 A 1503
source : AC3

7) chain A
residue 1409
type
sequence F
description binding site for residue 5C0 A 1503
source : AC3

8) chain A
residue 1412
type
sequence L
description binding site for residue 5C0 A 1503
source : AC3

9) chain A
residue 1417
type
sequence E
description binding site for residue 5C0 A 1503
source : AC3

10) chain A
residue 1418
type
sequence L
description binding site for residue 5C0 A 1503
source : AC3

11) chain A
residue 1421
type
sequence Y
description binding site for residue 5C0 A 1503
source : AC3

12) chain A
residue 1429
type
sequence V
description binding site for residue 5C0 A 1503
source : AC3

13) chain A
residue 1459
type
sequence N
description binding site for residue 5C0 A 1503
source : AC3

14) chain A
residue 1460
type
sequence A
description binding site for residue 5C0 A 1503
source : AC3

15) chain A
residue 1464
type
sequence N
description binding site for residue 5C0 A 1503
source : AC3

16) chain A
residue 1470
type
sequence I
description binding site for residue 5C0 A 1503
source : AC3

17) chain B
residue 1441
type
sequence H
description binding site for residue ZN B 1501
source : AC4

18) chain B
residue 1458
type
sequence H
description binding site for residue ZN B 1501
source : AC4

19) chain B
residue 1441
type
sequence H
description binding site for residue ZN B 1502
source : AC5

20) chain B
residue 1458
type
sequence H
description binding site for residue ZN B 1502
source : AC5

21) chain B
residue 1467
type
sequence G
description binding site for residue EDO B 1503
source : AC6

22) chain B
residue 1472
type
sequence E
description binding site for residue EDO B 1503
source : AC6

23) chain C
residue 1417
type
sequence E
description binding site for residue EDO B 1503
source : AC6

24) chain A
residue 1382
type
sequence K
description binding site for residue EDO B 1504
source : AC7

25) chain B
residue 1417
type
sequence E
description binding site for residue EDO B 1504
source : AC7

26) chain C
residue 1490
type
sequence K
description binding site for residue EDO B 1504
source : AC7

27) chain C
residue 1491
type
sequence E
description binding site for residue EDO B 1504
source : AC7

28) chain A
residue 1489
type
sequence A
description binding site for residue 5C0 B 1505
source : AC8

29) chain B
residue 1408
type
sequence V
description binding site for residue 5C0 B 1505
source : AC8

30) chain B
residue 1409
type
sequence F
description binding site for residue 5C0 B 1505
source : AC8

31) chain B
residue 1412
type
sequence L
description binding site for residue 5C0 B 1505
source : AC8

32) chain B
residue 1421
type
sequence Y
description binding site for residue 5C0 B 1505
source : AC8

33) chain B
residue 1429
type
sequence V
description binding site for residue 5C0 B 1505
source : AC8

34) chain B
residue 1460
type
sequence A
description binding site for residue 5C0 B 1505
source : AC8

35) chain B
residue 1464
type
sequence N
description binding site for residue 5C0 B 1505
source : AC8

36) chain B
residue 1470
type
sequence I
description binding site for residue 5C0 B 1505
source : AC8

37) chain C
residue 1441
type
sequence H
description binding site for residue ZN C 1501
source : AC9

38) chain C
residue 1458
type
sequence H
description binding site for residue ZN C 1501
source : AC9

39) chain C
residue 1441
type
sequence H
description binding site for residue ZN C 1502
source : AD1

40) chain C
residue 1458
type
sequence H
description binding site for residue ZN C 1502
source : AD1

41) chain A
residue 1406-1463
type prosite
sequence SEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRS
LGDLEKDVMLLCHNAQTF
description BROMODOMAIN_1 Bromodomain signature. SevFiqlpSrkelp..EYYelIrkpVdfkkIkerirnhk..Yrslgdlekdvml.LchNAqtF
source prosite : PS00633

42) chain A
residue 1377
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:23186163, ECO:0007744|PubMed:24275569
source Swiss-Prot : SWS_FT_FI1


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