eF-site ID 5df5-B
PDB Code 5df5
Chain B

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Title The structure of oxidized rat cytochrome c (T28E) at 1.30 angstroms resolution.
Classification ELECTRON TRANSPORT
Compound Cytochrome c, somatic
Source Rattus norvegicus (Rat) (CYC_RAT)
Sequence B:  GDVEKGKKIFVQKCAQCHTVEKGGKHKEGPNLHGLFGRKT
GQAAGFSYTDANKNKGITWGEDTLMEYLENPKKYIPGTKM
IFAGIKKKGERADLIAYLKKATNE
Description


Functional site

1) chain B
residue 87
type
sequence K
description binding site for residue FC6 B 202
source : AC2

2) chain B
residue 88
type
sequence K
description binding site for residue FC6 B 202
source : AC2

3) chain B
residue 89
type
sequence G
description binding site for residue FC6 B 202
source : AC2

4) chain B
residue 90
type
sequence E
description binding site for residue FC6 B 202
source : AC2

5) chain B
residue 2
type
sequence D
description binding site for residue FC6 B 203
source : AC3

6) chain B
residue 4
type
sequence E
description binding site for residue FC6 B 203
source : AC3

7) chain B
residue 8
type
sequence K
description binding site for residue FC6 B 203
source : AC3

8) chain B
residue 39
type
sequence K
description binding site for residue FC6 B 203
source : AC3

9) chain B
residue 56
type
sequence G
description binding site for residue FC6 B 203
source : AC3

10) chain B
residue 58
type
sequence T
description binding site for residue FC6 B 203
source : AC3

11) chain B
residue 10
type
sequence F
description binding site for Di-peptide HEC B 201 and CYS B 14
source : AC5

12) chain B
residue 13
type
sequence K
description binding site for Di-peptide HEC B 201 and CYS B 14
source : AC5

13) chain B
residue 15
type
sequence A
description binding site for Di-peptide HEC B 201 and CYS B 14
source : AC5

14) chain B
residue 16
type
sequence Q
description binding site for Di-peptide HEC B 201 and CYS B 14
source : AC5

15) chain B
residue 17
type
sequence C
description binding site for Di-peptide HEC B 201 and CYS B 14
source : AC5

16) chain B
residue 18
type
sequence H
description binding site for Di-peptide HEC B 201 and CYS B 14
source : AC5

17) chain B
residue 28
type
sequence E
description binding site for Di-peptide HEC B 201 and CYS B 14
source : AC5

18) chain B
residue 29
type
sequence G
description binding site for Di-peptide HEC B 201 and CYS B 14
source : AC5

19) chain B
residue 30
type
sequence P
description binding site for Di-peptide HEC B 201 and CYS B 14
source : AC5

20) chain B
residue 40
type
sequence T
description binding site for Di-peptide HEC B 201 and CYS B 14
source : AC5

21) chain B
residue 41
type
sequence G
description binding site for Di-peptide HEC B 201 and CYS B 14
source : AC5

22) chain B
residue 48
type
sequence Y
description binding site for Di-peptide HEC B 201 and CYS B 14
source : AC5

23) chain B
residue 49
type
sequence T
description binding site for Di-peptide HEC B 201 and CYS B 14
source : AC5

24) chain B
residue 52
type
sequence N
description binding site for Di-peptide HEC B 201 and CYS B 14
source : AC5

25) chain B
residue 59
type
sequence W
description binding site for Di-peptide HEC B 201 and CYS B 14
source : AC5

26) chain B
residue 67
type
sequence Y
description binding site for Di-peptide HEC B 201 and CYS B 14
source : AC5

27) chain B
residue 78
type
sequence T
description binding site for Di-peptide HEC B 201 and CYS B 14
source : AC5

28) chain B
residue 79
type
sequence K
description binding site for Di-peptide HEC B 201 and CYS B 14
source : AC5

29) chain B
residue 80
type
sequence M
description binding site for Di-peptide HEC B 201 and CYS B 14
source : AC5

30) chain B
residue 81
type
sequence I
description binding site for Di-peptide HEC B 201 and CYS B 14
source : AC5

31) chain B
residue 82
type
sequence F
description binding site for Di-peptide HEC B 201 and CYS B 14
source : AC5

32) chain B
residue 13
type
sequence K
description binding site for Di-peptide HEC B 201 and CYS B 17
source : AC6

33) chain B
residue 14
type
sequence C
description binding site for Di-peptide HEC B 201 and CYS B 17
source : AC6

34) chain B
residue 15
type
sequence A
description binding site for Di-peptide HEC B 201 and CYS B 17
source : AC6

35) chain B
residue 16
type
sequence Q
description binding site for Di-peptide HEC B 201 and CYS B 17
source : AC6

36) chain B
residue 18
type
sequence H
description binding site for Di-peptide HEC B 201 and CYS B 17
source : AC6

37) chain B
residue 27
type
sequence K
description binding site for Di-peptide HEC B 201 and CYS B 17
source : AC6

38) chain B
residue 28
type
sequence E
description binding site for Di-peptide HEC B 201 and CYS B 17
source : AC6

39) chain B
residue 29
type
sequence G
description binding site for Di-peptide HEC B 201 and CYS B 17
source : AC6

40) chain B
residue 30
type
sequence P
description binding site for Di-peptide HEC B 201 and CYS B 17
source : AC6

41) chain B
residue 40
type
sequence T
description binding site for Di-peptide HEC B 201 and CYS B 17
source : AC6

42) chain B
residue 41
type
sequence G
description binding site for Di-peptide HEC B 201 and CYS B 17
source : AC6

43) chain B
residue 48
type
sequence Y
description binding site for Di-peptide HEC B 201 and CYS B 17
source : AC6

44) chain B
residue 49
type
sequence T
description binding site for Di-peptide HEC B 201 and CYS B 17
source : AC6

45) chain B
residue 52
type
sequence N
description binding site for Di-peptide HEC B 201 and CYS B 17
source : AC6

46) chain B
residue 59
type
sequence W
description binding site for Di-peptide HEC B 201 and CYS B 17
source : AC6

47) chain B
residue 67
type
sequence Y
description binding site for Di-peptide HEC B 201 and CYS B 17
source : AC6

48) chain B
residue 78
type
sequence T
description binding site for Di-peptide HEC B 201 and CYS B 17
source : AC6

49) chain B
residue 79
type
sequence K
description binding site for Di-peptide HEC B 201 and CYS B 17
source : AC6

50) chain B
residue 80
type
sequence M
description binding site for Di-peptide HEC B 201 and CYS B 17
source : AC6

51) chain B
residue 81
type
sequence I
description binding site for Di-peptide HEC B 201 and CYS B 17
source : AC6

52) chain B
residue 82
type
sequence F
description binding site for Di-peptide HEC B 201 and CYS B 17
source : AC6

53) chain B
residue 81
type
sequence I
description binding site for Di-peptide HEC C 201 and CYS C 17
source : AC7

54) chain B
residue 1
type MOD_RES
sequence G
description N-acetylglycine => ECO:0000269|PubMed:191069
source Swiss-Prot : SWS_FT_FI3

55) chain B
residue 48
type MOD_RES
sequence Y
description Phosphotyrosine => ECO:0000250|UniProtKB:P62894
source Swiss-Prot : SWS_FT_FI4

56) chain B
residue 97
type MOD_RES
sequence Y
description Phosphotyrosine => ECO:0000250|UniProtKB:P62894
source Swiss-Prot : SWS_FT_FI4

57) chain B
residue 55
type MOD_RES
sequence K
description N6-succinyllysine => ECO:0000250|UniProtKB:P62897
source Swiss-Prot : SWS_FT_FI5

58) chain B
residue 72
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000250|UniProtKB:P62897
source Swiss-Prot : SWS_FT_FI6

59) chain B
residue 99
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0000250|UniProtKB:P62897
source Swiss-Prot : SWS_FT_FI7

60) chain B
residue 14
type BINDING
sequence C
description covalent
source Swiss-Prot : SWS_FT_FI1

61) chain B
residue 17
type BINDING
sequence C
description covalent
source Swiss-Prot : SWS_FT_FI1

62) chain B
residue 18
type BINDING
sequence H
description axial binding residue
source Swiss-Prot : SWS_FT_FI2

63) chain B
residue 80
type BINDING
sequence M
description axial binding residue
source Swiss-Prot : SWS_FT_FI2


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