eF-site ID 5ddy-C
PDB Code 5ddy
Chain C

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Title Binary complex of human Polymerase lambda with dCTP
Classification TRANSFERASE
Compound DNA polymerase lambda
Source Homo sapiens (Human) (DPOLL_HUMAN)
Sequence C:  ATNHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKS
FHKPVTSYQEACSIPGIGKRMAEKIIEILESGHLRKLDHI
SESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQAS
LTTQQAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNS
GLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLL
DSLRQEGFLTDDLVSQEENGQQQKYLGVCRLPGPGRRHRR
LDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLS
EHALSTAVVRNTHGCKVGPGRVLPTPTEKDVFRLLGLPYR
EPAERDW
Description


Functional site

1) chain C
residue 416
type
sequence G
description binding site for residue MG C 601
source : AC5

2) chain C
residue 417
type
sequence S
description binding site for residue MG C 601
source : AC5

3) chain C
residue 427
type
sequence D
description binding site for residue MG C 601
source : AC5

4) chain C
residue 429
type
sequence D
description binding site for residue MG C 601
source : AC5

5) chain C
residue 427
type
sequence D
description binding site for residue MN C 602
source : AC6

6) chain C
residue 429
type
sequence D
description binding site for residue MN C 602
source : AC6

7) chain C
residue 490
type
sequence D
description binding site for residue MN C 602
source : AC6

8) chain C
residue 386
type
sequence R
description binding site for residue DCP C 603
source : AC7

9) chain C
residue 416
type
sequence G
description binding site for residue DCP C 603
source : AC7

10) chain C
residue 417
type
sequence S
description binding site for residue DCP C 603
source : AC7

11) chain C
residue 420
type
sequence R
description binding site for residue DCP C 603
source : AC7

12) chain C
residue 426
type
sequence G
description binding site for residue DCP C 603
source : AC7

13) chain C
residue 427
type
sequence D
description binding site for residue DCP C 603
source : AC7

14) chain C
residue 429
type
sequence D
description binding site for residue DCP C 603
source : AC7

15) chain C
residue 505
type
sequence Y
description binding site for residue DCP C 603
source : AC7

16) chain C
residue 506
type
sequence F
description binding site for residue DCP C 603
source : AC7

17) chain C
residue 508
type
sequence G
description binding site for residue DCP C 603
source : AC7

18) chain C
residue 513
type
sequence N
description binding site for residue DCP C 603
source : AC7

19) chain C
residue 339
type
sequence S
description binding site for residue MN C 604
source : AC8

20) chain C
residue 312
type ACT_SITE
sequence K
description Schiff-base intermediate with DNA => ECO:0000269|PubMed:11457865
source Swiss-Prot : SWS_FT_FI1

21) chain C
residue 386
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:17475573, ECO:0007744|PDB:2PFP, ECO:0007744|PDB:2PFQ
source Swiss-Prot : SWS_FT_FI2

22) chain C
residue 417
type BINDING
sequence S
description BINDING => ECO:0000269|PubMed:17475573, ECO:0007744|PDB:2PFP, ECO:0007744|PDB:2PFQ
source Swiss-Prot : SWS_FT_FI2

23) chain C
residue 426
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:17475573, ECO:0007744|PDB:2PFP, ECO:0007744|PDB:2PFQ
source Swiss-Prot : SWS_FT_FI2

24) chain C
residue 513
type BINDING
sequence N
description BINDING => ECO:0000269|PubMed:17475573, ECO:0007744|PDB:2PFP, ECO:0007744|PDB:2PFQ
source Swiss-Prot : SWS_FT_FI2

25) chain C
residue 427
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:17475573, ECO:0007744|PDB:2PFO, ECO:0007744|PDB:2PFQ
source Swiss-Prot : SWS_FT_FI3

26) chain C
residue 429
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:17475573, ECO:0007744|PDB:2PFO, ECO:0007744|PDB:2PFQ
source Swiss-Prot : SWS_FT_FI3

27) chain C
residue 490
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:17475573, ECO:0007744|PDB:2PFO, ECO:0007744|PDB:2PFQ
source Swiss-Prot : SWS_FT_FI3


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