eF-site ID 5da7-A
PDB Code 5da7
Chain A

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Title monomeric PCNA bound to a small protein inhibitor
Classification DNA binding protein/inhibitor
Compound DNA polymerase sliding clamp 1, Proliferating cell nuclear antigen
Source Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) (Pyrococcus kodakaraensis (strain KOD1)) (Q5JH72_THEKO)
Sequence A:  PFEVVFDGAKEFADLIATASNLIDEAAFKFTEEGISMRAM
DPSRVVLIDLNLPESIFSKYEVEEPETIGINMDQFKKILK
RGKAKDTLILRKGDENFLEITFEGTAKRTFRLPLIDVEEL
ELELPELPFTAKVVLLGEVLKEGIKDASLVSDAIKFIAKE
NEFTMKAEGETNEVEIRLTLEDEGLLDLEVEEETKSAYGI
RYLSDMVKGIGKADEVILRFGNEMPLQMEYMIRDEGRLTF
LLAPRVE
Description


Functional site

1) chain A
residue 45
type
sequence R
description binding site for residue SO4 A 301
source : AC1

2) chain A
residue 94
type
sequence G
description binding site for residue SO4 A 302
source : AC2

3) chain A
residue 95
type
sequence D
description binding site for residue SO4 A 302
source : AC2

4) chain A
residue 96
type
sequence E
description binding site for residue SO4 A 302
source : AC2

5) chain A
residue 112
type
sequence R
description binding site for residue SO4 A 302
source : AC2

6) chain A
residue 160
type
sequence K
description binding site for residue SO4 A 303
source : AC3

7) chain A
residue 194
type
sequence E
description binding site for residue SO4 A 303
source : AC3

8) chain A
residue 196
type
sequence K
description binding site for residue SO4 A 303
source : AC3

9) chain A
residue 46
type
sequence V
description binding site for residue SO4 A 304
source : AC4

10) chain A
residue 200
type
sequence G
description binding site for residue SO4 A 304
source : AC4

11) chain A
residue 203
type
sequence Y
description binding site for residue SO4 A 304
source : AC4

12) chain A
residue 244
type
sequence A
description binding site for residue SO4 A 304
source : AC4

13) chain A
residue 245
type
sequence P
description binding site for residue SO4 A 304
source : AC4

14) chain A
residue 246
type
sequence R
description binding site for residue SO4 A 304
source : AC4

15) chain A
residue 117
type
sequence D
description binding site for residue SO4 A 305
source : AC5

16) chain A
residue 212
type
sequence G
description binding site for residue SO4 A 306
source : AC6

17) chain A
residue 213
type
sequence K
description binding site for residue SO4 A 306
source : AC6

18) chain A
residue 117
type
sequence D
description binding site for residue SO4 A 307
source : AC7

19) chain A
residue 133
type
sequence K
description binding site for residue SO4 A 308
source : AC8

20) chain A
residue 192
type
sequence E
description binding site for residue SO4 A 308
source : AC8

21) chain A
residue 193
type
sequence E
description binding site for residue SO4 A 308
source : AC8

22) chain A
residue 194
type
sequence E
description binding site for residue SO4 A 308
source : AC8

23) chain A
residue 220
type
sequence R
description binding site for residue SO4 A 308
source : AC8

24) chain A
residue 30
type
sequence K
description binding site for residue SO4 A 309
source : AC9

25) chain A
residue 122
type
sequence E
description binding site for residue SO4 A 309
source : AC9

26) chain A
residue 123
type
sequence L
description binding site for residue SO4 A 309
source : AC9

27) chain A
residue 153
type
sequence D
description binding site for residue SO4 A 310
source : AD1

28) chain A
residue 246
type
sequence R
description binding site for residue SO4 A 310
source : AD1

29) chain A
residue 35-58
type prosite
sequence GISMRAMDPSRVVLIDLNLPESIF
description PCNA_1 Proliferating cell nuclear antigen signature 1. GIsMrAMDpSRVvLIdLnLpesiF
source prosite : PS01251


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