|
|
eF-site ID
|
5cp6-B |
|
PDB Code
|
5cp6 |
|
Chain
|
B |
|
click to enlarge
|
|
|
Title
|
Nucleosome Core Particle with Adducts from the Anticancer Compound, [(eta6-5,8,9,10-tetrahydroanthracene)Ru(ethylenediamine)Cl][PF6] |
|
Classification
|
STRUCTURAL PROTEIN/DNA |
|
Compound
|
DNA (145-MER) |
|
Source
|
Xenopus laevis (African clawed frog) (H2B11_XENLA) |
|
|
Sequence
|
B: |
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV
FLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGF
GG
|
|
|
Description
|
|
Functional site
|
|
|
1)
|
chain |
B |
| residue |
59 |
| type |
MOD_RES |
| sequence |
K
|
| description |
N6-glutaryllysine; alternate => ECO:0000250|UniProtKB:P62805
|
| source |
Swiss-Prot : SWS_FT_FI10
|
|
|
2)
|
chain |
B |
| residue |
77 |
| type |
MOD_RES |
| sequence |
K
|
| description |
N6-succinyllysine => ECO:0000250|UniProtKB:P62805
|
| source |
Swiss-Prot : SWS_FT_FI11
|
|
|
3)
|
chain |
B |
| residue |
31 |
| type |
CROSSLNK |
| sequence |
K
|
| description |
Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in UFM1); alternate => ECO:0000250|UniProtKB:P62805
|
| source |
Swiss-Prot : SWS_FT_FI12
|
|
|
4)
|
chain |
B |
| residue |
91 |
| type |
CROSSLNK |
| sequence |
K
|
| description |
Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate => ECO:0000250|UniProtKB:P62805
|
| source |
Swiss-Prot : SWS_FT_FI13
|
|
|
5)
|
chain |
B |
| residue |
51 |
| type |
MOD_RES |
| sequence |
Y
|
| description |
Phosphotyrosine => ECO:0000250|UniProtKB:P62805
|
| source |
Swiss-Prot : SWS_FT_FI9
|
|
|
6)
|
chain |
B |
| residue |
88 |
| type |
MOD_RES |
| sequence |
Y
|
| description |
Phosphotyrosine => ECO:0000250|UniProtKB:P62805
|
| source |
Swiss-Prot : SWS_FT_FI9
|
|
|
|