eF-site ID 5cj7-AB
PDB Code 5cj7
Chain A, B

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Title Human DNA polymerase lambda L431A mutant- MgdTTP binary and complex with 6 paired DNA
Classification TRANSFERASE/DNA
Compound DNA polymerase lambda
Source Homo sapiens (Human) (5CJ7)
Sequence A:  ESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASL
TTQQAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNSG
LLCVACGSYRRGKATCGDVDVAITHPDGRSHRGIFSRLLD
SLRQEGFLTDDLVSQEENGQQQKYLGVCRLPGPGRRHRRL
DIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSE
HALSTAVVRNTHGCKVGPGRVLPTPTEKDVFRLLGLPYRE
PAERDW
B:  PVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQ
QAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNSGLLC
VACGSYRRGKATCGDVDVAITHPDGRSHRGIFSRLLDSLR
QEGFLTDDLVSQEENGQQQKYLGVCRLPGPGRRHRRLDII
VVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHAL
STAVVRNTHGCKVGPGRVLPTPTEKDVFRLLGLPYREPAE
RDW
Description


Functional site

1) chain B
residue 427
type
sequence D
description binding site for residue MG B 601
source : AC1

2) chain B
residue 429
type
sequence D
description binding site for residue MG B 601
source : AC1

3) chain B
residue 386
type
sequence R
description binding site for residue TTP B 602
source : AC2

4) chain B
residue 416
type
sequence G
description binding site for residue TTP B 602
source : AC2

5) chain B
residue 417
type
sequence S
description binding site for residue TTP B 602
source : AC2

6) chain B
residue 420
type
sequence R
description binding site for residue TTP B 602
source : AC2

7) chain B
residue 426
type
sequence G
description binding site for residue TTP B 602
source : AC2

8) chain B
residue 427
type
sequence D
description binding site for residue TTP B 602
source : AC2

9) chain B
residue 429
type
sequence D
description binding site for residue TTP B 602
source : AC2

10) chain B
residue 505
type
sequence Y
description binding site for residue TTP B 602
source : AC2

11) chain B
residue 506
type
sequence F
description binding site for residue TTP B 602
source : AC2

12) chain B
residue 507
type
sequence T
description binding site for residue TTP B 602
source : AC2

13) chain B
residue 508
type
sequence G
description binding site for residue TTP B 602
source : AC2

14) chain B
residue 510
type
sequence A
description binding site for residue TTP B 602
source : AC2

15) chain B
residue 513
type
sequence N
description binding site for residue TTP B 602
source : AC2

16) chain A
residue 386
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:17475573, ECO:0007744|PDB:2PFP, ECO:0007744|PDB:2PFQ
source Swiss-Prot : SWS_FT_FI2

17) chain A
residue 417
type BINDING
sequence S
description BINDING => ECO:0000269|PubMed:17475573, ECO:0007744|PDB:2PFP, ECO:0007744|PDB:2PFQ
source Swiss-Prot : SWS_FT_FI2

18) chain A
residue 426
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:17475573, ECO:0007744|PDB:2PFP, ECO:0007744|PDB:2PFQ
source Swiss-Prot : SWS_FT_FI2

19) chain A
residue 513
type BINDING
sequence N
description BINDING => ECO:0000269|PubMed:17475573, ECO:0007744|PDB:2PFP, ECO:0007744|PDB:2PFQ
source Swiss-Prot : SWS_FT_FI2

20) chain B
residue 386
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:17475573, ECO:0007744|PDB:2PFP, ECO:0007744|PDB:2PFQ
source Swiss-Prot : SWS_FT_FI2

21) chain B
residue 417
type BINDING
sequence S
description BINDING => ECO:0000269|PubMed:17475573, ECO:0007744|PDB:2PFP, ECO:0007744|PDB:2PFQ
source Swiss-Prot : SWS_FT_FI2

22) chain B
residue 426
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:17475573, ECO:0007744|PDB:2PFP, ECO:0007744|PDB:2PFQ
source Swiss-Prot : SWS_FT_FI2

23) chain B
residue 513
type BINDING
sequence N
description BINDING => ECO:0000269|PubMed:17475573, ECO:0007744|PDB:2PFP, ECO:0007744|PDB:2PFQ
source Swiss-Prot : SWS_FT_FI2

24) chain A
residue 427
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:17475573, ECO:0007744|PDB:2PFO, ECO:0007744|PDB:2PFQ
source Swiss-Prot : SWS_FT_FI3

25) chain A
residue 429
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:17475573, ECO:0007744|PDB:2PFO, ECO:0007744|PDB:2PFQ
source Swiss-Prot : SWS_FT_FI3

26) chain A
residue 490
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:17475573, ECO:0007744|PDB:2PFO, ECO:0007744|PDB:2PFQ
source Swiss-Prot : SWS_FT_FI3

27) chain B
residue 427
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:17475573, ECO:0007744|PDB:2PFO, ECO:0007744|PDB:2PFQ
source Swiss-Prot : SWS_FT_FI3

28) chain B
residue 429
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:17475573, ECO:0007744|PDB:2PFO, ECO:0007744|PDB:2PFQ
source Swiss-Prot : SWS_FT_FI3

29) chain B
residue 490
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:17475573, ECO:0007744|PDB:2PFO, ECO:0007744|PDB:2PFQ
source Swiss-Prot : SWS_FT_FI3


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