eF-site ID 5chg-AB
PDB Code 5chg
Chain A, B

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Title Human DNA polymerase lambda L431A mutant- MgdGTP binary and complex with 6 paired DNA
Classification TRANSFERASE/DNA
Compound DNA polymerase lambda
Source Homo sapiens (Human) (5CHG)
Sequence A:  ESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASL
TTQQAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNSG
LLCVACGSYRRGKATCGDVDVAITHPDGRSHRGIFSRLLD
SLRQEGFLTDDLVSQEENGQQQKYLGVCRLPGPGRRHRRL
DIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSE
HALSTAVVRNTHGCKVGPGRVLPTPTEKDVFRLLGLPYRE
PAERDW
B:  PVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQ
QAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNSGLLC
VACGSYRRGKATCGDVDVAITHPDGRSHRGIFSRLLDSLR
QEGFLTDDLVSQEENGQQQKYLGVCRLPGPGRRHRRLDII
VVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHAL
STAVVRNTHGCKVGPGRVLPTPTEKDVFRLLGLPYREPAE
RDW
Description


Functional site

1) chain A
residue 339
type
sequence S
description binding site for residue MG A 601
source : AC1

2) chain A
residue 341
type
sequence I
description binding site for residue MG A 601
source : AC1

3) chain A
residue 344
type
sequence A
description binding site for residue MG A 601
source : AC1

4) chain B
residue 514
type
sequence R
description binding site for residue SO4 B 601
source : AC2

5) chain B
residue 517
type
sequence R
description binding site for residue SO4 B 601
source : AC2

6) chain B
residue 427
type
sequence D
description binding site for residue MG B 602
source : AC3

7) chain B
residue 429
type
sequence D
description binding site for residue MG B 602
source : AC3

8) chain B
residue 386
type
sequence R
description binding site for residue DGT B 603
source : AC4

9) chain B
residue 416
type
sequence G
description binding site for residue DGT B 603
source : AC4

10) chain B
residue 417
type
sequence S
description binding site for residue DGT B 603
source : AC4

11) chain B
residue 420
type
sequence R
description binding site for residue DGT B 603
source : AC4

12) chain B
residue 426
type
sequence G
description binding site for residue DGT B 603
source : AC4

13) chain B
residue 427
type
sequence D
description binding site for residue DGT B 603
source : AC4

14) chain B
residue 429
type
sequence D
description binding site for residue DGT B 603
source : AC4

15) chain B
residue 505
type
sequence Y
description binding site for residue DGT B 603
source : AC4

16) chain B
residue 506
type
sequence F
description binding site for residue DGT B 603
source : AC4

17) chain B
residue 508
type
sequence G
description binding site for residue DGT B 603
source : AC4

18) chain B
residue 513
type
sequence N
description binding site for residue DGT B 603
source : AC4

19) chain A
residue 386
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:17475573, ECO:0007744|PDB:2PFP, ECO:0007744|PDB:2PFQ
source Swiss-Prot : SWS_FT_FI2

20) chain A
residue 417
type BINDING
sequence S
description BINDING => ECO:0000269|PubMed:17475573, ECO:0007744|PDB:2PFP, ECO:0007744|PDB:2PFQ
source Swiss-Prot : SWS_FT_FI2

21) chain A
residue 426
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:17475573, ECO:0007744|PDB:2PFP, ECO:0007744|PDB:2PFQ
source Swiss-Prot : SWS_FT_FI2

22) chain A
residue 513
type BINDING
sequence N
description BINDING => ECO:0000269|PubMed:17475573, ECO:0007744|PDB:2PFP, ECO:0007744|PDB:2PFQ
source Swiss-Prot : SWS_FT_FI2

23) chain B
residue 386
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:17475573, ECO:0007744|PDB:2PFP, ECO:0007744|PDB:2PFQ
source Swiss-Prot : SWS_FT_FI2

24) chain B
residue 417
type BINDING
sequence S
description BINDING => ECO:0000269|PubMed:17475573, ECO:0007744|PDB:2PFP, ECO:0007744|PDB:2PFQ
source Swiss-Prot : SWS_FT_FI2

25) chain B
residue 426
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:17475573, ECO:0007744|PDB:2PFP, ECO:0007744|PDB:2PFQ
source Swiss-Prot : SWS_FT_FI2

26) chain B
residue 513
type BINDING
sequence N
description BINDING => ECO:0000269|PubMed:17475573, ECO:0007744|PDB:2PFP, ECO:0007744|PDB:2PFQ
source Swiss-Prot : SWS_FT_FI2

27) chain A
residue 427
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:17475573, ECO:0007744|PDB:2PFO, ECO:0007744|PDB:2PFQ
source Swiss-Prot : SWS_FT_FI3

28) chain A
residue 429
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:17475573, ECO:0007744|PDB:2PFO, ECO:0007744|PDB:2PFQ
source Swiss-Prot : SWS_FT_FI3

29) chain A
residue 490
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:17475573, ECO:0007744|PDB:2PFO, ECO:0007744|PDB:2PFQ
source Swiss-Prot : SWS_FT_FI3

30) chain B
residue 427
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:17475573, ECO:0007744|PDB:2PFO, ECO:0007744|PDB:2PFQ
source Swiss-Prot : SWS_FT_FI3

31) chain B
residue 429
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:17475573, ECO:0007744|PDB:2PFO, ECO:0007744|PDB:2PFQ
source Swiss-Prot : SWS_FT_FI3

32) chain B
residue 490
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:17475573, ECO:0007744|PDB:2PFO, ECO:0007744|PDB:2PFQ
source Swiss-Prot : SWS_FT_FI3


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