eF-site ID 5cci-E
PDB Code 5cci
Chain E

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Title Structure of the Mg2+-bound synaptotagmin-1 SNARE complex (short unit cell form)
Classification ENDOCYTOSIS,EXOCYTOSIS
Compound Vesicle-associated membrane protein 2
Source Rattus norvegicus (Rat) (SYT1_RAT)
Sequence E:  KLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPY
VKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELG
GKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWR
DLQSAEKEEQEKLGDICFSLRYVPTAGKLTVVILEAKNLK
KMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYN
ESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGY
NSTGAELRHWSDMLANPRRPIAQWHTLQVEEEVDAMLAVK
Description


Functional site

1) chain E
residue 303
type
sequence D
description binding site for residue MG E 501
source : AC1

2) chain E
residue 309
type
sequence D
description binding site for residue MG E 501
source : AC1

3) chain E
residue 363
type
sequence D
description binding site for residue MG E 501
source : AC1

4) chain E
residue 364
type
sequence Y
description binding site for residue MG E 501
source : AC1

5) chain E
residue 365
type
sequence D
description binding site for residue MG E 501
source : AC1

6) chain E
residue 172
type
sequence D
description binding site for residue MG E 502
source : AC2

7) chain E
residue 178
type
sequence D
description binding site for residue MG E 502
source : AC2

8) chain E
residue 231
type
sequence F
description binding site for residue MG E 502
source : AC2

9) chain E
residue 232
type
sequence D
description binding site for residue MG E 502
source : AC2

10) chain E
residue 346
type
sequence E
description binding site for residue MG E 502
source : AC2

11) chain E
residue 264
type MOD_RES
sequence S
description Phosphoserine => ECO:0000250|UniProtKB:P46096
source Swiss-Prot : SWS_FT_FI3

12) chain E
residue 342
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:22673903
source Swiss-Prot : SWS_FT_FI4

13) chain E
residue 344
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:22673903
source Swiss-Prot : SWS_FT_FI4

14) chain E
residue 171
type BINDING
sequence L
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00041
source Swiss-Prot : SWS_FT_FI1

15) chain E
residue 303
type BINDING
sequence D
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00041
source Swiss-Prot : SWS_FT_FI1

16) chain E
residue 309
type BINDING
sequence D
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00041
source Swiss-Prot : SWS_FT_FI1

17) chain E
residue 363
type BINDING
sequence D
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00041
source Swiss-Prot : SWS_FT_FI1

18) chain E
residue 365
type BINDING
sequence D
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00041
source Swiss-Prot : SWS_FT_FI1

19) chain E
residue 371
type BINDING
sequence D
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00041
source Swiss-Prot : SWS_FT_FI1

20) chain E
residue 172
type BINDING
sequence D
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00041
source Swiss-Prot : SWS_FT_FI1

21) chain E
residue 178
type BINDING
sequence D
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00041
source Swiss-Prot : SWS_FT_FI1

22) chain E
residue 230
type BINDING
sequence D
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00041
source Swiss-Prot : SWS_FT_FI1

23) chain E
residue 231
type BINDING
sequence F
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00041
source Swiss-Prot : SWS_FT_FI1

24) chain E
residue 232
type BINDING
sequence D
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00041
source Swiss-Prot : SWS_FT_FI1

25) chain E
residue 235
type BINDING
sequence S
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00041
source Swiss-Prot : SWS_FT_FI1

26) chain E
residue 236
type BINDING
sequence K
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00041
source Swiss-Prot : SWS_FT_FI1

27) chain E
residue 238
type BINDING
sequence D
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00041
source Swiss-Prot : SWS_FT_FI1

28) chain E
residue 229
type MOD_RES
sequence Y
description Phosphotyrosine => ECO:0000250|UniProtKB:P46096
source Swiss-Prot : SWS_FT_FI2


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