eF-site ID 5cbx-ABCDEFGH
PDB Code 5cbx
Chain A, B, C, D, E, F, G, H

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Title AncGR DNA Binding Domain - (+)GRE Complex
Classification dna binding protein/dna
Compound AncGR DNA Binding Domain
Source (5CBX)
Sequence A:  KICLVCGDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCA
GRNDCIIDKIRRKNCPACRFRKCLQAGMNLEA
B:  PPKICLVCGDEASGCHYGVLTCGSCKVFFKRAVEGQHNYL
CAGRNDCIIDKIRRKNCPACRFRKCLQAGMNLEA
C:  CCAGAACAGAGTGTTCTG
D:  TCAGAACACTCTGTTCTG
E:  PPKICLVCGDEASGCHYGVLTCGSCKVFFKRAVEGQHNYL
CAGRNDCIIDKIRRKNCPACRFRKCLQAGMNLE
F:  PPKICLVCGDEASGCHYGVLTCGSCKVFFKRAVEGQHNYL
CAGRNDCIIDKIRRKNCPACRFRKCLQAGMNLEA
G:  TCAGAACACTCTGTTCTG
H:  CCAGAACAGAGTGTTCTG
Description


Functional site

1) chain A
residue 421
type
sequence C
description binding site for residue ZN A 501
source : AC1

2) chain A
residue 424
type
sequence C
description binding site for residue ZN A 501
source : AC1

3) chain A
residue 438
type
sequence C
description binding site for residue ZN A 501
source : AC1

4) chain A
residue 441
type
sequence C
description binding site for residue ZN A 501
source : AC1

5) chain A
residue 457
type
sequence C
description binding site for residue ZN A 502
source : AC2

6) chain A
residue 463
type
sequence C
description binding site for residue ZN A 502
source : AC2

7) chain A
residue 473
type
sequence C
description binding site for residue ZN A 502
source : AC2

8) chain A
residue 476
type
sequence C
description binding site for residue ZN A 502
source : AC2

9) chain B
residue 421
type
sequence C
description binding site for residue ZN B 501
source : AC3

10) chain B
residue 424
type
sequence C
description binding site for residue ZN B 501
source : AC3

11) chain B
residue 438
type
sequence C
description binding site for residue ZN B 501
source : AC3

12) chain B
residue 441
type
sequence C
description binding site for residue ZN B 501
source : AC3

13) chain B
residue 457
type
sequence C
description binding site for residue ZN B 502
source : AC4

14) chain B
residue 463
type
sequence C
description binding site for residue ZN B 502
source : AC4

15) chain B
residue 473
type
sequence C
description binding site for residue ZN B 502
source : AC4

16) chain B
residue 476
type
sequence C
description binding site for residue ZN B 502
source : AC4

17) chain E
residue 421
type
sequence C
description binding site for residue ZN E 501
source : AC5

18) chain E
residue 424
type
sequence C
description binding site for residue ZN E 501
source : AC5

19) chain E
residue 438
type
sequence C
description binding site for residue ZN E 501
source : AC5

20) chain E
residue 441
type
sequence C
description binding site for residue ZN E 501
source : AC5

21) chain E
residue 457
type
sequence C
description binding site for residue ZN E 502
source : AC6

22) chain E
residue 463
type
sequence C
description binding site for residue ZN E 502
source : AC6

23) chain E
residue 473
type
sequence C
description binding site for residue ZN E 502
source : AC6

24) chain E
residue 476
type
sequence C
description binding site for residue ZN E 502
source : AC6

25) chain F
residue 421
type
sequence C
description binding site for residue ZN F 501
source : AC7

26) chain F
residue 424
type
sequence C
description binding site for residue ZN F 501
source : AC7

27) chain F
residue 438
type
sequence C
description binding site for residue ZN F 501
source : AC7

28) chain F
residue 441
type
sequence C
description binding site for residue ZN F 501
source : AC7

29) chain F
residue 457
type
sequence C
description binding site for residue ZN F 502
source : AC8

30) chain F
residue 463
type
sequence C
description binding site for residue ZN F 502
source : AC8

31) chain F
residue 473
type
sequence C
description binding site for residue ZN F 502
source : AC8

32) chain F
residue 476
type
sequence C
description binding site for residue ZN F 502
source : AC8

33) chain A
residue 421-447
type prosite
sequence CLVCGDEASGCHYGVLTCGSCKVFFKR
description NUCLEAR_REC_DBD_1 Nuclear hormones receptors DNA-binding region signature. ClvCg.Deasgc.HYgvltCgsCkvFFkR
source prosite : PS00031

34) chain A
residue 421-441
type ZN_FING
sequence CLVCGDEASGCHYGVLTCGSC
description NR C4-type => ECO:0000255|PROSITE-ProRule:PRU00407
source Swiss-Prot : SWS_FT_FI2

35) chain A
residue 457-476
type ZN_FING
sequence CAGRNDCIIDKIRRKNCPAC
description NR C4-type => ECO:0000255|PROSITE-ProRule:PRU00407
source Swiss-Prot : SWS_FT_FI2

36) chain B
residue 421-441
type ZN_FING
sequence CLVCGDEASGCHYGVLTCGSC
description NR C4-type => ECO:0000255|PROSITE-ProRule:PRU00407
source Swiss-Prot : SWS_FT_FI2

37) chain B
residue 457-476
type ZN_FING
sequence CAGRNDCIIDKIRRKNCPAC
description NR C4-type => ECO:0000255|PROSITE-ProRule:PRU00407
source Swiss-Prot : SWS_FT_FI2

38) chain E
residue 421-441
type ZN_FING
sequence CLVCGDEASGCHYGVLTCGSC
description NR C4-type => ECO:0000255|PROSITE-ProRule:PRU00407
source Swiss-Prot : SWS_FT_FI2

39) chain E
residue 457-476
type ZN_FING
sequence CAGRNDCIIDKIRRKNCPAC
description NR C4-type => ECO:0000255|PROSITE-ProRule:PRU00407
source Swiss-Prot : SWS_FT_FI2

40) chain F
residue 421-441
type ZN_FING
sequence CLVCGDEASGCHYGVLTCGSC
description NR C4-type => ECO:0000255|PROSITE-ProRule:PRU00407
source Swiss-Prot : SWS_FT_FI2

41) chain F
residue 457-476
type ZN_FING
sequence CAGRNDCIIDKIRRKNCPAC
description NR C4-type => ECO:0000255|PROSITE-ProRule:PRU00407
source Swiss-Prot : SWS_FT_FI2

42) chain A
residue 480
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0000269|PubMed:19141540
source Swiss-Prot : SWS_FT_FI3

43) chain B
residue 480
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0000269|PubMed:19141540
source Swiss-Prot : SWS_FT_FI3

44) chain E
residue 480
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0000269|PubMed:19141540
source Swiss-Prot : SWS_FT_FI3

45) chain F
residue 480
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0000269|PubMed:19141540
source Swiss-Prot : SWS_FT_FI3

46) chain E
residue 419
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P06537
source Swiss-Prot : SWS_FT_FI4

47) chain F
residue 419
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P06537
source Swiss-Prot : SWS_FT_FI4

48) chain A
residue 419
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P06537
source Swiss-Prot : SWS_FT_FI4

49) chain B
residue 419
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P06537
source Swiss-Prot : SWS_FT_FI4


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