|
eF-site ID
|
5cb1-A |
PDB Code
|
5cb1 |
Chain
|
A |
|
click to enlarge
|
|
Title
|
Apo enzyme of human Polymerase lambda |
Classification
|
TRANSFERASE |
Compound
|
DNA polymerase lambda |
Source
|
Homo sapiens (Human) (DPOLL_HUMAN) |
|
Sequence
|
A: |
TNHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSF
HKPVTSYQEACSIPGIGKRMAEKIIEILESGHLRKLDHIS
ESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASL
TTQQAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNSG
LLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLD
SLRQEGFLTDDLVSQEENGQQQKYLGVCRLPGPGRRHRRL
DIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSE
HALSTAVVRNTHGCKVGPGRVLPTPTEKDVFRLLGLPYRE
PAERDW
|
|
Description
|
|
Functional site
|
|
1)
|
chain |
A |
residue |
312 |
type |
ACT_SITE |
sequence |
K
|
description |
Schiff-base intermediate with DNA => ECO:0000269|PubMed:11457865
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
2)
|
chain |
A |
residue |
386 |
type |
BINDING |
sequence |
R
|
description |
BINDING => ECO:0000269|PubMed:17475573, ECO:0007744|PDB:2PFP, ECO:0007744|PDB:2PFQ
|
source |
Swiss-Prot : SWS_FT_FI2
|
|
3)
|
chain |
A |
residue |
417 |
type |
BINDING |
sequence |
S
|
description |
BINDING => ECO:0000269|PubMed:17475573, ECO:0007744|PDB:2PFP, ECO:0007744|PDB:2PFQ
|
source |
Swiss-Prot : SWS_FT_FI2
|
|
4)
|
chain |
A |
residue |
426 |
type |
BINDING |
sequence |
G
|
description |
BINDING => ECO:0000269|PubMed:17475573, ECO:0007744|PDB:2PFP, ECO:0007744|PDB:2PFQ
|
source |
Swiss-Prot : SWS_FT_FI2
|
|
5)
|
chain |
A |
residue |
513 |
type |
BINDING |
sequence |
N
|
description |
BINDING => ECO:0000269|PubMed:17475573, ECO:0007744|PDB:2PFP, ECO:0007744|PDB:2PFQ
|
source |
Swiss-Prot : SWS_FT_FI2
|
|
6)
|
chain |
A |
residue |
427 |
type |
BINDING |
sequence |
D
|
description |
BINDING => ECO:0000269|PubMed:17475573, ECO:0007744|PDB:2PFO, ECO:0007744|PDB:2PFQ
|
source |
Swiss-Prot : SWS_FT_FI3
|
|
7)
|
chain |
A |
residue |
429 |
type |
BINDING |
sequence |
D
|
description |
BINDING => ECO:0000269|PubMed:17475573, ECO:0007744|PDB:2PFO, ECO:0007744|PDB:2PFQ
|
source |
Swiss-Prot : SWS_FT_FI3
|
|
8)
|
chain |
A |
residue |
490 |
type |
BINDING |
sequence |
D
|
description |
BINDING => ECO:0000269|PubMed:17475573, ECO:0007744|PDB:2PFO, ECO:0007744|PDB:2PFQ
|
source |
Swiss-Prot : SWS_FT_FI3
|
|
9)
|
chain |
A |
residue |
416-435 |
type |
prosite |
sequence |
GSYRRGKATCGDVDVLITHP
|
description |
DNA_POLYMERASE_X DNA polymerase family X signature. GSYrRGkatCgDVDVLIthP
|
source |
prosite : PS00522
|
|
|
|