eF-site ID 5caw-C
PDB Code 5caw
Chain C

click to enlarge
Title Structure of Pediculus humanus Parkin bound to phospho-ubiquitin
Classification SIGNALING PROTEIN
Compound E3 ubiquitin-protein ligase parkin
Source Pediculus humanus subsp. corporis (Body louse) (UBB_HUMAN)
Sequence C:  NKAHFFIYCANPCKKINTGKLRVCCSECKHGAFTVDTDPQ
SWADVLDKNKITGVCNNVGCEGLYAKFYFKCASHPSQGEN
DTAVPLNLIKRNHKKIPCLACTDICDPVLVFSCDNRHVTC
LECFKNYCGSRLKDRQFLSHPDFGYTLPCPAGCSNSFIEE
VHHFRLLTDAQYEQYHRFATEEFILQAGGVLCPQPGCGQG
ILIDQNCNRVQCSCGYVFCGKCLEGFHLGECLNPTDVPFL
SQPLDPEKLEKARWDEASSTVIKVLTKPCPKCRTSTERAG
GCMHMICTRANCGFHWCWVCQGPWERDCMASHWFG
Description


Functional site
1) chain C
residue 151
type
sequence C
description binding site for residue ZN C 1001
source : AD1
2) chain C
residue 155
type
sequence C
description binding site for residue ZN C 1001
source : AD1
3) chain C
residue 213
type
sequence C
description binding site for residue ZN C 1001
source : AD1
4) chain C
residue 216
type
sequence H
description binding site for residue ZN C 1001
source : AD1
5) chain C
residue 167
type
sequence C
description binding site for residue ZN C 1002
source : AD2
6) chain C
residue 170
type
sequence C
description binding site for residue ZN C 1002
source : AD2
7) chain C
residue 197
type
sequence C
description binding site for residue ZN C 1002
source : AD2
8) chain C
residue 202
type
sequence C
description binding site for residue ZN C 1002
source : AD2
9) chain C
residue 240
type
sequence C
description binding site for residue ZN C 1003
source : AD3
10) chain C
residue 243
type
sequence C
description binding site for residue ZN C 1003
source : AD3
11) chain C
residue 262
type
sequence C
description binding site for residue ZN C 1003
source : AD3
12) chain C
residue 265
type
sequence C
description binding site for residue ZN C 1003
source : AD3
13) chain C
residue 255
type
sequence C
description binding site for residue ZN C 1004
source : AD4
14) chain C
residue 259
type
sequence H
description binding site for residue ZN C 1004
source : AD4
15) chain C
residue 291
type
sequence C
description binding site for residue ZN C 1004
source : AD4
16) chain C
residue 295
type
sequence C
description binding site for residue ZN C 1004
source : AD4
17) chain C
residue 334
type
sequence C
description binding site for residue ZN C 1005
source : AD5
18) chain C
residue 339
type
sequence C
description binding site for residue ZN C 1005
source : AD5
19) chain C
residue 354
type
sequence C
description binding site for residue ZN C 1005
source : AD5
20) chain C
residue 356
type
sequence C
description binding site for residue ZN C 1005
source : AD5
21) chain C
residue 361
type
sequence C
description binding site for residue ZN C 1006
source : AD6
22) chain C
residue 364
type
sequence C
description binding site for residue ZN C 1006
source : AD6
23) chain C
residue 369
type
sequence H
description binding site for residue ZN C 1006
source : AD6
24) chain C
residue 373
type
sequence C
description binding site for residue ZN C 1006
source : AD6
25) chain C
residue 415
type
sequence C
description binding site for residue ZN C 1007
source : AD7
26) chain C
residue 418
type
sequence C
description binding site for residue ZN C 1007
source : AD7
27) chain C
residue 433
type
sequence C
description binding site for residue ZN C 1007
source : AD7
28) chain C
residue 438
type
sequence C
description binding site for residue ZN C 1007
source : AD7
29) chain C
residue 443
type
sequence C
description binding site for residue ZN C 1008
source : AD8
30) chain C
residue 446
type
sequence C
description binding site for residue ZN C 1008
source : AD8
31) chain C
residue 454
type
sequence C
description binding site for residue ZN C 1008
source : AD8
32) chain C
residue 458
type
sequence H
description binding site for residue ZN C 1008
source : AD8
33) chain C
residue 184
type
sequence W
description binding site for residue SO4 C 1009
source : AD9
34) chain C
residue 232
type
sequence K
description binding site for residue SO4 C 1009
source : AD9
35) chain C
residue 258
type
sequence R
description binding site for residue SO4 C 1009
source : AD9
36) chain C
residue 195
type
sequence G
description binding site for residue SO4 C 1010
source : AE1
37) chain C
residue 196
type
sequence V
description binding site for residue SO4 C 1010
source : AE1
38) chain C
residue 197
type
sequence C
description binding site for residue SO4 C 1010
source : AE1
39) chain C
residue 202
type
sequence C
description binding site for residue SO4 C 1010
source : AE1
40) chain C
residue 203
type
sequence E
description binding site for residue SO4 C 1010
source : AE1
41) chain C
residue 204
type
sequence G
description binding site for residue SO4 C 1010
source : AE1
42) chain C
residue 310
type
sequence T
description binding site for residue SO4 C 1011
source : AE2
43) chain C
residue 311
type
sequence D
description binding site for residue SO4 C 1011
source : AE2
44) chain C
residue 346
type
sequence D
description binding site for Di-peptide GLY D 75 and 3CN D 76
source : AE4
45) chain C
residue 349
type
sequence C
description binding site for Di-peptide GLY D 75 and 3CN D 76
source : AE4
46) chain C
residue 351
type
sequence R
description binding site for Di-peptide GLY D 75 and 3CN D 76
source : AE4
47) chain C
residue 151
type CROSSLNK
sequence C
description Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins)
source Swiss-Prot : SWS_FT_FI7
48) chain C
residue 155
type CROSSLNK
sequence C
description Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins)
source Swiss-Prot : SWS_FT_FI7
49) chain C
residue 167
type CROSSLNK
sequence C
description Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins)
source Swiss-Prot : SWS_FT_FI7
50) chain C
residue 170
type CROSSLNK
sequence C
description Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins)
source Swiss-Prot : SWS_FT_FI7
51) chain C
residue 197
type CROSSLNK
sequence C
description Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins)
source Swiss-Prot : SWS_FT_FI7
52) chain C
residue 202
type CROSSLNK
sequence C
description Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins)
source Swiss-Prot : SWS_FT_FI7
53) chain C
residue 213
type CROSSLNK
sequence C
description Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins)
source Swiss-Prot : SWS_FT_FI7
54) chain C
residue 216
type CROSSLNK
sequence H
description Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins)
source Swiss-Prot : SWS_FT_FI7
55) chain C
residue 443
type CROSSLNK
sequence C
description Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins)
source Swiss-Prot : SWS_FT_FI7
56) chain C
residue 446
type CROSSLNK
sequence C
description Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins)
source Swiss-Prot : SWS_FT_FI7
57) chain C
residue 454
type CROSSLNK
sequence C
description Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins)
source Swiss-Prot : SWS_FT_FI7
58) chain C
residue 458
type CROSSLNK
sequence H
description Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins)
source Swiss-Prot : SWS_FT_FI7
59) chain C
residue 240
type CROSSLNK
sequence C
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16443603, ECO:0000269|PubMed:16543144
source Swiss-Prot : SWS_FT_FI8
60) chain C
residue 243
type CROSSLNK
sequence C
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16443603, ECO:0000269|PubMed:16543144
source Swiss-Prot : SWS_FT_FI8
61) chain C
residue 255
type CROSSLNK
sequence C
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16443603, ECO:0000269|PubMed:16543144
source Swiss-Prot : SWS_FT_FI8
62) chain C
residue 259
type CROSSLNK
sequence H
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16443603, ECO:0000269|PubMed:16543144
source Swiss-Prot : SWS_FT_FI8
63) chain C
residue 262
type CROSSLNK
sequence C
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16443603, ECO:0000269|PubMed:16543144
source Swiss-Prot : SWS_FT_FI8
64) chain C
residue 265
type CROSSLNK
sequence C
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16443603, ECO:0000269|PubMed:16543144
source Swiss-Prot : SWS_FT_FI8
65) chain C
residue 291
type CROSSLNK
sequence C
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16443603, ECO:0000269|PubMed:16543144
source Swiss-Prot : SWS_FT_FI8
66) chain C
residue 295
type CROSSLNK
sequence C
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16443603, ECO:0000269|PubMed:16543144
source Swiss-Prot : SWS_FT_FI8
67) chain C
residue 334
type CROSSLNK
sequence C
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16443603, ECO:0000269|PubMed:16543144
source Swiss-Prot : SWS_FT_FI8
68) chain C
residue 339
type CROSSLNK
sequence C
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16443603, ECO:0000269|PubMed:16543144
source Swiss-Prot : SWS_FT_FI8
69) chain C
residue 354
type CROSSLNK
sequence C
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16443603, ECO:0000269|PubMed:16543144
source Swiss-Prot : SWS_FT_FI8
70) chain C
residue 356
type CROSSLNK
sequence C
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16443603, ECO:0000269|PubMed:16543144
source Swiss-Prot : SWS_FT_FI8
71) chain C
residue 361
type CROSSLNK
sequence C
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16443603, ECO:0000269|PubMed:16543144
source Swiss-Prot : SWS_FT_FI8
72) chain C
residue 364
type CROSSLNK
sequence C
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16443603, ECO:0000269|PubMed:16543144
source Swiss-Prot : SWS_FT_FI8
73) chain C
residue 369
type CROSSLNK
sequence H
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16443603, ECO:0000269|PubMed:16543144
source Swiss-Prot : SWS_FT_FI8
74) chain C
residue 373
type CROSSLNK
sequence C
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16443603, ECO:0000269|PubMed:16543144
source Swiss-Prot : SWS_FT_FI8
75) chain C
residue 415
type CROSSLNK
sequence C
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16443603, ECO:0000269|PubMed:16543144
source Swiss-Prot : SWS_FT_FI8
76) chain C
residue 418
type CROSSLNK
sequence C
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16443603, ECO:0000269|PubMed:16543144
source Swiss-Prot : SWS_FT_FI8
77) chain C
residue 433
type CROSSLNK
sequence C
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16443603, ECO:0000269|PubMed:16543144
source Swiss-Prot : SWS_FT_FI8
78) chain C
residue 438
type CROSSLNK
sequence C
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16443603, ECO:0000269|PubMed:16543144
source Swiss-Prot : SWS_FT_FI8
79) chain C
residue 304
type CROSSLNK
sequence H
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000305|PubMed:15466860
source Swiss-Prot : SWS_FT_FI9
80) chain C
residue 307
type CROSSLNK
sequence R
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000305|PubMed:15466860
source Swiss-Prot : SWS_FT_FI9
81) chain C
residue 314
type CROSSLNK
sequence Y
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000305|PubMed:15466860
source Swiss-Prot : SWS_FT_FI9

Display surface

Download
Links