eF-site ID 5c9j-A
PDB Code 5c9j
Chain A

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Title Human CD1c with ligands in A' and F' channel
Classification IMMUNE SYSTEM
Compound T-cell surface glycoprotein CD1c,T-cell surface glycoprotein CD1b
Source Homo sapiens (Human) (B2MG_HUMAN)
Sequence A:  EHVSFHVIQIFSFVNQSWARGQGSGWLDELQTHGWDSESG
TIIFLHNWSKGNFSNEELSDLELLFRFYLFGLTREIQDHA
SQDYSKYPFEVQVKAGCELHSGKSPEGFFQVAFNGLDLLS
FQNTTWVPSPGCGSLAQSVCHLLNHQYEGVTETVYNLIRS
TCPRFLLGLLDAGKMYVHRQVKPEAWLSSGPSPGPGRLQL
VCHVSGFYPKPVWVMWMRGEQEQQGTQLGDILPNANWTWY
LRATLDVADGEAAGLSCRVKHSSLEGQDIILYWGPGSGGG
L
Description


Functional site

1) chain A
residue 83
type
sequence E
description binding site for residue DAO A 301
source : AC1

2) chain A
residue 87
type
sequence H
description binding site for residue DAO A 301
source : AC1

3) chain A
residue 147
type
sequence V
description binding site for residue DAO A 301
source : AC1

4) chain A
residue 87
type
sequence H
description binding site for residue DAO A 302
source : AC2

5) chain A
residue 121
type
sequence F
description binding site for residue DAO A 302
source : AC2

6) chain A
residue 73
type
sequence F
description binding site for residue STE A 303
source : AC3

7) chain A
residue 76
type
sequence Y
description binding site for residue STE A 303
source : AC3

8) chain A
residue 117
type
sequence F
description binding site for residue STE A 303
source : AC3

9) chain A
residue 165
type
sequence L
description binding site for residue STE A 303
source : AC3

10) chain A
residue 173
type
sequence F
description binding site for residue STE A 303
source : AC3

11) chain A
residue 110
type
sequence G
description binding site for residue GOL A 304
source : AC4

12) chain A
residue 111
type
sequence K
description binding site for residue GOL A 304
source : AC4

13) chain A
residue 195
type
sequence L
description binding site for residue GOL A 304
source : AC4

14) chain A
residue 280
type
sequence Y
description binding site for residue GOL A 304
source : AC4

15) chain A
residue 287
type
sequence G
description binding site for residue GOL A 304
source : AC4

16) chain A
residue 242
type
sequence N
description binding site for residue GOL A 305
source : AC5

17) chain A
residue 243
type
sequence A
description binding site for residue GOL A 305
source : AC5

18) chain A
residue 245
type
sequence W
description binding site for residue GOL A 305
source : AC5

19) chain A
residue 20
type
sequence S
description binding site for residue GOL A 306
source : AC6

20) chain A
residue 22
type
sequence V
description binding site for residue GOL A 306
source : AC6

21) chain A
residue 28
type
sequence R
description binding site for residue GOL A 306
source : AC6

22) chain A
residue 28
type
sequence R
description binding site for residue PO4 A 307
source : AC7

23) chain A
residue 29
type
sequence G
description binding site for residue PO4 A 307
source : AC7

24) chain A
residue 43
type
sequence W
description binding site for residue PO4 A 307
source : AC7

25) chain A
residue 45
type
sequence S
description binding site for residue PO4 A 307
source : AC7

26) chain A
residue 14
type
sequence H
description binding site for residue PO4 A 308
source : AC8

27) chain A
residue 34
type
sequence W
description binding site for residue PO4 A 308
source : AC8

28) chain A
residue 36
type
sequence D
description binding site for residue PO4 A 308
source : AC8

29) chain A
residue 131
type CARBOHYD
sequence N
description N-linked (Glc) (glycation) isoleucine; in hemodialysis-associated amyloidosis => ECO:0000269|PubMed:7918443
source Swiss-Prot : SWS_FT_FI2

30) chain A
residue 244
type CARBOHYD
sequence N
description N-linked (Glc) (glycation) isoleucine; in hemodialysis-associated amyloidosis => ECO:0000269|PubMed:7918443
source Swiss-Prot : SWS_FT_FI2


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