eF-site ID 5c6m-D
PDB Code 5c6m
Chain D

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Title Crystal structure of deoxyribose-phosphate aldolase from Shewanella halifaxensis
Classification LYASE
Compound Deoxyribose-phosphate aldolase
Source Shewanella halifaxensis (strain HAW-EB4) (DEOC_SHEHH)
Sequence D:  SDLKKAAQQAISLMDLTTLNDDDTDQKVIELCHKAKTPAG
DTAAICIYPRFIPIARKTLNEIGGDDIKIATVTNFPHGND
DIAIAVLETRAAVAYGADEVDVVFPYRALMEGNETVGFEL
VKACKEACGEDTILKVIIESGVLADPALIRKASELSIDAG
ADFIKTSTGKVAVNATLEAAEIMMTVISEKNPKVGFKPAG
GVKDAAAAAEFLGVAARLLGDDWATPATFRFGASSLLTNL
LHTLELAD
Description


Functional site

1) chain D
residue 51
type
sequence R
description binding site for residue CL C 301
source : AC5

2) chain D
residue 50
type
sequence P
description binding site for residue CL D 301
source : AC6

3) chain D
residue 51
type
sequence R
description binding site for residue CL D 301
source : AC6

4) chain D
residue 102
type ACT_SITE
sequence D
description Proton donor/acceptor => ECO:0000255|HAMAP-Rule:MF_00592
source Swiss-Prot : SWS_FT_FI1

5) chain D
residue 198
type ACT_SITE
sequence K
description Proton donor/acceptor => ECO:0000255|HAMAP-Rule:MF_00592
source Swiss-Prot : SWS_FT_FI1

6) chain D
residue 166
type ACT_SITE
sequence K
description Schiff-base intermediate with acetaldehyde => ECO:0000255|HAMAP-Rule:MF_00592
source Swiss-Prot : SWS_FT_FI2


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