|
|
eF-site ID
|
5c6m-C |
|
PDB Code
|
5c6m |
|
Chain
|
C |
|
click to enlarge
|
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Title
|
Crystal structure of deoxyribose-phosphate aldolase from Shewanella halifaxensis |
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Classification
|
LYASE |
|
Compound
|
Deoxyribose-phosphate aldolase |
|
Source
|
Shewanella halifaxensis (strain HAW-EB4) (DEOC_SHEHH) |
|
|
Sequence
|
C: |
SDLKKAAQQAISLMDLTTLNDDDTDQKVIELCHKAKTPAG
DTAAICIYPRFIPIARKTLNEIGGDDIKIATVTNFPHGND
DIAIAVLETRAAVAYGADEVDVVFPYRALMEGNETVGFEL
VKACKEACGEDTILKVIIESGVLADPALIRKASELSIDAG
ADFIKTSTGKVAVNATLEAAEIMMTVISEKNPKVGFKPAG
GVKDAAAAAEFLGVAARLLGDDWATPATFRFGASSLLTNL
LHTLEL
|
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Description
|
|
Functional site
|
|
|
1)
|
chain |
C |
| residue |
50 |
| type |
|
| sequence |
P
|
| description |
binding site for residue CL C 301
|
| source |
: AC5
|
|
|
2)
|
chain |
C |
| residue |
51 |
| type |
|
| sequence |
R
|
| description |
binding site for residue CL C 301
|
| source |
: AC5
|
|
|
3)
|
chain |
C |
| residue |
102 |
| type |
ACT_SITE |
| sequence |
D
|
| description |
Proton donor/acceptor => ECO:0000255|HAMAP-Rule:MF_00592
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
4)
|
chain |
C |
| residue |
198 |
| type |
ACT_SITE |
| sequence |
K
|
| description |
Proton donor/acceptor => ECO:0000255|HAMAP-Rule:MF_00592
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
5)
|
chain |
C |
| residue |
166 |
| type |
ACT_SITE |
| sequence |
K
|
| description |
Schiff-base intermediate with acetaldehyde => ECO:0000255|HAMAP-Rule:MF_00592
|
| source |
Swiss-Prot : SWS_FT_FI2
|
|
|
|