eF-site ID 5c6m-C
PDB Code 5c6m
Chain C

click to enlarge
Title Crystal structure of deoxyribose-phosphate aldolase from Shewanella halifaxensis
Classification LYASE
Compound Deoxyribose-phosphate aldolase
Source Shewanella halifaxensis (strain HAW-EB4) (DEOC_SHEHH)
Sequence C:  SDLKKAAQQAISLMDLTTLNDDDTDQKVIELCHKAKTPAG
DTAAICIYPRFIPIARKTLNEIGGDDIKIATVTNFPHGND
DIAIAVLETRAAVAYGADEVDVVFPYRALMEGNETVGFEL
VKACKEACGEDTILKVIIESGVLADPALIRKASELSIDAG
ADFIKTSTGKVAVNATLEAAEIMMTVISEKNPKVGFKPAG
GVKDAAAAAEFLGVAARLLGDDWATPATFRFGASSLLTNL
LHTLEL
Description


Functional site

1) chain C
residue 50
type
sequence P
description binding site for residue CL C 301
source : AC5

2) chain C
residue 51
type
sequence R
description binding site for residue CL C 301
source : AC5

3) chain C
residue 102
type ACT_SITE
sequence D
description Proton donor/acceptor => ECO:0000255|HAMAP-Rule:MF_00592
source Swiss-Prot : SWS_FT_FI1

4) chain C
residue 198
type ACT_SITE
sequence K
description Proton donor/acceptor => ECO:0000255|HAMAP-Rule:MF_00592
source Swiss-Prot : SWS_FT_FI1

5) chain C
residue 166
type ACT_SITE
sequence K
description Schiff-base intermediate with acetaldehyde => ECO:0000255|HAMAP-Rule:MF_00592
source Swiss-Prot : SWS_FT_FI2


Display surface

Download
Links