eF-site ID 5c6m-ABCD PDB Code 5c6m Chain A, B, C, D click to enlarge Title Crystal structure of deoxyribose-phosphate aldolase from Shewanella halifaxensis Classification LYASE Compound Deoxyribose-phosphate aldolase Source Shewanella halifaxensis (strain HAW-EB4) (DEOC_SHEHH) Sequence A:  MSDLKKAAQQAISLMDLTTLNDDDTDQKVIELCHKAKTPA GDTAAICIYPRFIPIARKTLNEIGGDDIKIATVTNFPHGN DDIAIAVLETRAAVAYGADEVDVVFPYRALMEGNETVGFE LVKACKEACGEDTILKVIIESGVLADPALIRKASELSIDA GADFIKTSTGKVAVNATLEAAEIMMTVISEKNPKVGFKPA GGVKDAAAAAEFLGVAARLLGDDWATPATFRFGASSLLTN LLHTLELA B:  MSDLKKAAQQAISLMDLTTLNDDDTDQKVIELCHKAKTPA GDTAAICIYPRFIPIARKTLNEIGGDDIKIATVTNFPHGN DDIAIAVLETRAAVAYGADEVDVVFPYRALMEGNETVGFE LVKACKEACGEDTILKVIIESGVLADPALIRKASELSIDA GADFIKTSTGKVAVNATLEAAEIMMTVISEKNPKVGFKPA GGVKDAAAAAEFLGVAARLLGDDWATPATFRFGASSLLTN LLHTLELA C:  SDLKKAAQQAISLMDLTTLNDDDTDQKVIELCHKAKTPAG DTAAICIYPRFIPIARKTLNEIGGDDIKIATVTNFPHGND DIAIAVLETRAAVAYGADEVDVVFPYRALMEGNETVGFEL VKACKEACGEDTILKVIIESGVLADPALIRKASELSIDAG ADFIKTSTGKVAVNATLEAAEIMMTVISEKNPKVGFKPAG GVKDAAAAAEFLGVAARLLGDDWATPATFRFGASSLLTNL LHTLEL D:  SDLKKAAQQAISLMDLTTLNDDDTDQKVIELCHKAKTPAG DTAAICIYPRFIPIARKTLNEIGGDDIKIATVTNFPHGND DIAIAVLETRAAVAYGADEVDVVFPYRALMEGNETVGFEL VKACKEACGEDTILKVIIESGVLADPALIRKASELSIDAG ADFIKTSTGKVAVNATLEAAEIMMTVISEKNPKVGFKPAG GVKDAAAAAEFLGVAARLLGDDWATPATFRFGASSLLTNL LHTLELAD Description Functional site 1) chain A residue 76 type sequence F description binding site for residue NA A 301 source : AC1 2) chain A residue 50 type sequence P description binding site for residue CL A 302 source : AC2 3) chain A residue 51 type sequence R description binding site for residue CL A 302 source : AC2 4) chain B residue 76 type sequence F description binding site for residue NA B 301 source : AC3 5) chain B residue 50 type sequence P description binding site for residue CL B 302 source : AC4 6) chain B residue 51 type sequence R description binding site for residue CL B 302 source : AC4 7) chain C residue 50 type sequence P description binding site for residue CL C 301 source : AC5 8) chain C residue 51 type sequence R description binding site for residue CL C 301 source : AC5 9) chain D residue 51 type sequence R description binding site for residue CL C 301 source : AC5 10) chain D residue 50 type sequence P description binding site for residue CL D 301 source : AC6 11) chain D residue 51 type sequence R description binding site for residue CL D 301 source : AC6 12) chain A residue 102 type ACT_SITE sequence D description Proton donor/acceptor => ECO:0000255|HAMAP-Rule:MF_00592 source Swiss-Prot : SWS_FT_FI1 13) chain A residue 198 type ACT_SITE sequence K description Proton donor/acceptor => ECO:0000255|HAMAP-Rule:MF_00592 source Swiss-Prot : SWS_FT_FI1 14) chain B residue 102 type ACT_SITE sequence D description Proton donor/acceptor => ECO:0000255|HAMAP-Rule:MF_00592 source Swiss-Prot : SWS_FT_FI1 15) chain B residue 198 type ACT_SITE sequence K description Proton donor/acceptor => ECO:0000255|HAMAP-Rule:MF_00592 source Swiss-Prot : SWS_FT_FI1 16) chain C residue 102 type ACT_SITE sequence D description Proton donor/acceptor => ECO:0000255|HAMAP-Rule:MF_00592 source Swiss-Prot : SWS_FT_FI1 17) chain C residue 198 type ACT_SITE sequence K description Proton donor/acceptor => ECO:0000255|HAMAP-Rule:MF_00592 source Swiss-Prot : SWS_FT_FI1 18) chain D residue 102 type ACT_SITE sequence D description Proton donor/acceptor => ECO:0000255|HAMAP-Rule:MF_00592 source Swiss-Prot : SWS_FT_FI1 19) chain D residue 198 type ACT_SITE sequence K description Proton donor/acceptor => ECO:0000255|HAMAP-Rule:MF_00592 source Swiss-Prot : SWS_FT_FI1 20) chain A residue 166 type ACT_SITE sequence K description Schiff-base intermediate with acetaldehyde => ECO:0000255|HAMAP-Rule:MF_00592 source Swiss-Prot : SWS_FT_FI2 21) chain B residue 166 type ACT_SITE sequence K description Schiff-base intermediate with acetaldehyde => ECO:0000255|HAMAP-Rule:MF_00592 source Swiss-Prot : SWS_FT_FI2 22) chain C residue 166 type ACT_SITE sequence K description Schiff-base intermediate with acetaldehyde => ECO:0000255|HAMAP-Rule:MF_00592 source Swiss-Prot : SWS_FT_FI2 23) chain D residue 166 type ACT_SITE sequence K description Schiff-base intermediate with acetaldehyde => ECO:0000255|HAMAP-Rule:MF_00592 source Swiss-Prot : SWS_FT_FI2

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