eF-site ID 5c4a-I PDB Code 5c4a Chain I click to enlarge Title Crystal structure of a transcribing RNA Polymerase II complex reveals a complete transcription bubble Classification TRANSFERASE/RNA/DNA Compound DNA-directed RNA polymerase II subunit RPB1 Source ORGANISM_COMMON: Baker's yeast; ORGANISM_SCIENTIFIC: Saccharomyces cerevisiae (strain ATCC 204508 / S288c); Sequence I:  TTFRFCRDCNNMLYPREDKENNRLLFECRTCSYVEEAGSP LVYRHELITNIGETAGVVQDIGSDPTLPRSDRECPKCHSR ENVFFQSQQRRKDTSMVLFFVCLSCSHIFTSDQK Description Functional site 1) chain I residue 7 type sequence C description binding site for residue ZN I 201 source : AC7 2) chain I residue 10 type sequence C description binding site for residue ZN I 201 source : AC7 3) chain I residue 29 type sequence C description binding site for residue ZN I 201 source : AC7 4) chain I residue 32 type sequence C description binding site for residue ZN I 201 source : AC7 5) chain I residue 75 type sequence C description binding site for residue ZN I 202 source : AC8 6) chain I residue 78 type sequence C description binding site for residue ZN I 202 source : AC8 7) chain I residue 80 type sequence S description binding site for residue ZN I 202 source : AC8 8) chain I residue 106 type sequence C description binding site for residue ZN I 202 source : AC8 9) chain I residue 75-110 type prosite sequence CPKCHSRENVFFQSQQRRKDTSMVLFFVCLSCSHIF description ZF_TFIIS_1 Zinc finger TFIIS-type signature. CpkChsrenvffqSQQRRkDTSmvlffvCls...CshiF source prosite : PS00466 10) chain I residue 6-32 type prosite sequence FCRDCNNMLYPREDKENNRLLFECRTC description RNA_POL_M_15KD RNA polymerases M / 15 Kd subunits signature. FCrDCNNMLypredkennrllfeCrtC source prosite : PS01030 11) chain I residue 40 type MOD_RES sequence S description Phosphoserine => ECO:0007744|PubMed:18407956 source Swiss-Prot : SWS_FT_FI5 12) chain I residue 10 type MOD_RES sequence C description Phosphoserine => ECO:0007744|PubMed:17330950, ECO:0007744|PubMed:18407956 source Swiss-Prot : SWS_FT_FI3 13) chain I residue 32 type MOD_RES sequence C description Phosphoserine => ECO:0007744|PubMed:17330950, ECO:0007744|PubMed:18407956 source Swiss-Prot : SWS_FT_FI3 14) chain I residue 78 type CROSSLNK sequence C description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000305|PubMed:32142654, ECO:0007744|PubMed:22106047 source Swiss-Prot : SWS_FT_FI4 15) chain I residue 103 type CROSSLNK sequence C description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000305|PubMed:32142654, ECO:0007744|PubMed:22106047 source Swiss-Prot : SWS_FT_FI4 16) chain I residue 106 type CROSSLNK sequence C description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000305|PubMed:32142654, ECO:0007744|PubMed:22106047 source Swiss-Prot : SWS_FT_FI4

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