eF-site ID 5c44-B PDB Code 5c44 Chain B click to enlarge Title Crystal structure of a transcribing RNA Polymerase II complex reveals a complete transcription bubble Classification TRANSFERASE/DNA/RNA Compound DNA-directed RNA polymerase II subunit RPB1 Source ORGANISM_COMMON: Baker's yeast; ORGANISM_SCIENTIFIC: Saccharomyces cerevisiae (strain ATCC 204508 / S288c); Sequence B:  DESAPITAEDSWAVISAFFREKGLVSQQLDSFNQFVDYTL QDIICEDSTLILEQLAQHTTESDNISRKYEISFGKIYVTK PMVNESDGVTHALYPQEARLRNLTYSSGLFVDVKKRTYEA IDVPGRELKYELIDSESGKVFIGRLPIMLRSKNCYLSEAT ESDLYKLKECPFDMGGYFIINGSEKVLIAQERSAGNIVQV FKKAAPSPISHVAEIRSALEKGRFISTLQVKLYGRSSART IATLPYIKQDIPIVIIFRALGIIPDGEILEHICYDVNDWQ MLEMLKPCVEDGFVIQDRETALDFIGRLGIRIQYAKDILQ KEFLPHITQLEGFESRKAFFLGYMINRLLLCALDRKDQDD RDHFGKKRLDLAGPLLAQLFKTLFKKLTKDIFRYMQRTVE EAHDFNMKLAINAKTITSGLKYALATGNWGEQKKAMSSRA GVSQVLNRYTYSSTLSHLRRTNTPIGRDGKPRQLHNTHWG LVCPAETPEGQACGLVKNLSLMSCISVGTDPMPIITFLSE WGMEPLEDYVPHQSPDATRVFVNGVWHGVHRNPARLMETL RTLRRKGDINPEVSMIRDIREKELKIFTDAGRVYRPLFIV EDDESLGHKELKVRKGHIAKLMATEYQDEYTWSSLLNEGL VEYIDAEEEESILIAMQPEDLEPAEAKRIRATTFTHCEIH PSMILGVAASIIPFPDHNQSPRNTYQSAMGKQAMGVFLTN YNVRMDTMANILYYPQKPLGTTRAMEYLKFRELPAGQNAI VAIACYSGYNQEDSMIMNQSSIDRGLFRSLFFRSYMDQEK KYGMSITETFEKPQRTNTLRMKHGTYDKLDDDGLIAPGVR VSGEDVIIGKTTPISPDEEELGTAYHSKRDASTPLRSTEN GIVDQVLVTTNQDGLKFVKVRVRTTKIPQIGDKFASRHGQ KGTIGITYRREDMPFTAEGIVPDLIINPHAIPSRMTVAHL IECLLSKVAALSGNEGDASPFTDITVEGISKLLREHGYQS RGFEVMYNGHTGKKLMAQIFFGPTYYQRLRHMVDDKIHAR ARGPMQVLTRQPVEGRSRDGGLRFGEMERDCMIAHGAASF LKERLMEASDAFRVHICGICGLMTVIAKLNHNQFECKGCD NKIDIYQIHIPYAAKLLFQELMAMNITPRLYTDRSRDF Description (1)  DNA-directed RNA polymerase II /RNA/DNA Complex Functional site 1) chain B residue 837 type catalytic sequence D description 788 source MCSA : MCSA1 2) chain B residue 1185 type BINDING sequence C description source Swiss-Prot : SWS_FT_FI2 3) chain B residue 977-989 type prosite sequence GDKFASRHGQKGT description RNA_POL_BETA RNA polymerases beta chain signature. GdKFASrHGQKGT source prosite : PS01166

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