eF-site ID 5c0i-ABC
PDB Code 5c0i
Chain A, B, C

click to enlarge
Title HAL-A02 carrying RQFGPDFPTI
Classification IMMUNE SYSTEM
Compound HLA class I histocompatibility antigen, A-2 alpha chain
Source Homo sapiens (Human) (5C0I)
Sequence A:  MGSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSD
AASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLG
TLRGYYNQSEAGSHTVQRMYGCDVGSDWRFLRGYHQYAYD
GKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAY
LEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEA
TLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDG
TFQKWAAVVVPSGQEQRYTCHVQHEGLPKPLTLRWEP
B:  MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDL
LKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYA
CRVNHVTLSQPKIVKWDRDM
C:  RQFGPDFPTI
Description


Functional site

1) chain A
residue 212
type
sequence E
description binding site for residue EDO A 301
source : AC1

2) chain A
residue 213
type
sequence I
description binding site for residue EDO A 301
source : AC1

3) chain A
residue 214
type
sequence T
description binding site for residue EDO A 301
source : AC1

4) chain A
residue 262
type
sequence Q
description binding site for residue EDO A 301
source : AC1

5) chain A
residue 263
type
sequence H
description binding site for residue EDO A 301
source : AC1

6) chain A
residue 264
type
sequence E
description binding site for residue EDO A 301
source : AC1

7) chain A
residue 105
type
sequence S
description binding site for residue EDO A 302
source : AC2

8) chain A
residue 107
type
sequence W
description binding site for residue EDO A 302
source : AC2

9) chain A
residue 195
type
sequence S
description binding site for residue EDO A 302
source : AC2

10) chain A
residue 198
type
sequence E
description binding site for residue EDO A 302
source : AC2

11) chain A
residue 138
type
sequence M
description binding site for residue EDO A 303
source : AC3

12) chain A
residue 141
type
sequence Q
description binding site for residue EDO A 303
source : AC3

13) chain A
residue 142
type
sequence T
description binding site for residue EDO A 303
source : AC3

14) chain A
residue 14
type
sequence R
description binding site for residue EDO A 304
source : AC4

15) chain A
residue 18
type
sequence G
description binding site for residue EDO A 304
source : AC4

16) chain A
residue 19
type
sequence E
description binding site for residue EDO A 304
source : AC4

17) chain A
residue 44
type
sequence R
description binding site for residue EDO A 305
source : AC5

18) chain A
residue 45
type
sequence M
description binding site for residue EDO A 305
source : AC5

19) chain A
residue 60
type
sequence W
description binding site for residue EDO A 305
source : AC5

20) chain A
residue 6
type
sequence R
description binding site for residue GOL A 306
source : AC6

21) chain A
residue 8
type
sequence F
description binding site for residue GOL A 306
source : AC6

22) chain A
residue 27
type
sequence Y
description binding site for residue GOL A 306
source : AC6

23) chain A
residue 29
type
sequence D
description binding site for residue GOL A 306
source : AC6

24) chain A
residue 30
type
sequence D
description binding site for residue GOL A 306
source : AC6

25) chain B
residue 63
type
sequence Y
description binding site for residue GOL A 306
source : AC6

26) chain A
residue 68
type
sequence K
description binding site for residue GOL A 307
source : AC7

27) chain A
residue 69
type
sequence A
description binding site for residue GOL A 307
source : AC7

28) chain A
residue 72
type
sequence Q
description binding site for residue GOL A 307
source : AC7

29) chain A
residue 166
type
sequence E
description binding site for residue SO4 A 308
source : AC8

30) chain A
residue 167
type
sequence W
description binding site for residue SO4 A 308
source : AC8

31) chain A
residue 170
type
sequence R
description binding site for residue SO4 A 308
source : AC8

32) chain A
residue 128
type
sequence E
description binding site for residue SO4 A 309
source : AC9

33) chain A
residue 129
type
sequence D
description binding site for residue SO4 A 309
source : AC9

34) chain A
residue 130
type
sequence L
description binding site for residue SO4 A 309
source : AC9

35) chain A
residue 131
type
sequence R
description binding site for residue SO4 A 309
source : AC9

36) chain A
residue 157
type
sequence R
description binding site for residue SO4 A 309
source : AC9

37) chain A
residue 161
type
sequence E
description binding site for residue SO4 A 309
source : AC9

38) chain B
residue 83
type
sequence N
description binding site for residue CA B 101
source : AD1

39) chain B
residue 84
type
sequence H
description binding site for residue CA B 101
source : AD1

40) chain B
residue 87
type
sequence L
description binding site for residue CA B 101
source : AD1

41) chain A
residue 206
type
sequence L
description binding site for residue EDO B 102
source : AD2

42) chain A
residue 234
type
sequence R
description binding site for residue EDO B 102
source : AD2

43) chain A
residue 242
type
sequence Q
description binding site for residue EDO B 102
source : AD2

44) chain B
residue 10
type
sequence Y
description binding site for residue EDO B 102
source : AD2

45) chain B
residue 11
type
sequence S
description binding site for residue EDO B 102
source : AD2

46) chain B
residue 13
type
sequence H
description binding site for residue EDO B 102
source : AD2

47) chain B
residue 14
type
sequence P
description binding site for residue EDO B 102
source : AD2

48) chain A
residue 21
type
sequence R
description binding site for residue EDO B 103
source : AD3

49) chain B
residue 33
type
sequence S
description binding site for residue EDO B 103
source : AD3

50) chain B
residue 34
type
sequence D
description binding site for residue EDO B 103
source : AD3

51) chain B
residue 95
type
sequence W
description binding site for residue EDO B 104
source : AD4

52) chain B
residue 97
type
sequence R
description binding site for residue EDO B 104
source : AD4

53) chain A
residue 115
type
sequence Q
description binding site for residue EDO B 105
source : AD5

54) chain B
residue 57
type
sequence S
description binding site for residue EDO B 105
source : AD5

55) chain B
residue 58
type
sequence K
description binding site for residue EDO B 105
source : AD5

56) chain B
residue 60
type
sequence W
description binding site for residue EDO B 105
source : AD5

57) chain A
residue 235
type
sequence P
description binding site for residue EDO B 106
source : AD6

58) chain B
residue 52
type
sequence S
description binding site for residue EDO B 106
source : AD6

59) chain B
residue 63
type
sequence Y
description binding site for residue EDO B 106
source : AD6

60) chain B
residue 8
type
sequence Q
description binding site for residue GOL B 107
source : AD7

61) chain B
residue 9
type
sequence V
description binding site for residue GOL B 107
source : AD7

62) chain B
residue 94
type
sequence K
description binding site for residue GOL B 107
source : AD7

63) chain B
residue 96
type
sequence D
description binding site for residue GOL B 107
source : AD7

64) chain A
residue 23
type
sequence I
description binding site for residue GOL B 108
source : AD8

65) chain A
residue 37
type
sequence D
description binding site for residue GOL B 108
source : AD8

66) chain B
residue 51
type
sequence H
description binding site for residue GOL B 108
source : AD8

67) chain B
residue 52
type
sequence S
description binding site for residue GOL B 108
source : AD8

68) chain B
residue 53
type
sequence D
description binding site for residue GOL B 108
source : AD8

69) chain B
residue 54
type
sequence L
description binding site for residue GOL B 108
source : AD8

70) chain B
residue 64
type
sequence L
description binding site for residue GOL B 108
source : AD8

71) chain A
residue 86
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:19159218
source Swiss-Prot : SWS_FT_FI4

72) chain B
residue 1
type CARBOHYD
sequence I
description N-linked (Glc) (glycation) isoleucine; in hemodialysis-associated amyloidosis => ECO:0000269|PubMed:7918443
source Swiss-Prot : SWS_FT_FI2

73) chain A
residue 159
type CARBOHYD
sequence Y
description N-linked (Glc) (glycation) isoleucine; in hemodialysis-associated amyloidosis => ECO:0000269|PubMed:7918443
source Swiss-Prot : SWS_FT_FI2

74) chain B
residue 19
type CARBOHYD
sequence K
description N-linked (Glc) (glycation) lysine; in vitro => ECO:0000269|PubMed:7918443
source Swiss-Prot : SWS_FT_FI3

75) chain B
residue 41
type CARBOHYD
sequence K
description N-linked (Glc) (glycation) lysine; in vitro => ECO:0000269|PubMed:7918443
source Swiss-Prot : SWS_FT_FI3

76) chain B
residue 48
type CARBOHYD
sequence K
description N-linked (Glc) (glycation) lysine; in vitro => ECO:0000269|PubMed:7918443
source Swiss-Prot : SWS_FT_FI3

77) chain B
residue 58
type CARBOHYD
sequence K
description N-linked (Glc) (glycation) lysine; in vitro => ECO:0000269|PubMed:7918443
source Swiss-Prot : SWS_FT_FI3

78) chain B
residue 91
type CARBOHYD
sequence K
description N-linked (Glc) (glycation) lysine; in vitro => ECO:0000269|PubMed:7918443
source Swiss-Prot : SWS_FT_FI3

79) chain B
residue 94
type CARBOHYD
sequence K
description N-linked (Glc) (glycation) lysine; in vitro => ECO:0000269|PubMed:7918443
source Swiss-Prot : SWS_FT_FI3

80) chain B
residue 2
type MOD_RES
sequence Q
description Pyrrolidone carboxylic acid; in form pI 5.3 => ECO:0000269|PubMed:7554280
source Swiss-Prot : SWS_FT_FI1

81) chain A
residue 73
type MOD_RES
sequence T
description Pyrrolidone carboxylic acid; in form pI 5.3 => ECO:0000269|PubMed:7554280
source Swiss-Prot : SWS_FT_FI1

82) chain A
residue 84
type MOD_RES
sequence Y
description Pyrrolidone carboxylic acid; in form pI 5.3 => ECO:0000269|PubMed:7554280
source Swiss-Prot : SWS_FT_FI1

83) chain A
residue 143
type MOD_RES
sequence T
description Pyrrolidone carboxylic acid; in form pI 5.3 => ECO:0000269|PubMed:7554280
source Swiss-Prot : SWS_FT_FI1

84) chain A
residue 146
type MOD_RES
sequence K
description Pyrrolidone carboxylic acid; in form pI 5.3 => ECO:0000269|PubMed:7554280
source Swiss-Prot : SWS_FT_FI1

85) chain A
residue 171
type MOD_RES
sequence Y
description Pyrrolidone carboxylic acid; in form pI 5.3 => ECO:0000269|PubMed:7554280
source Swiss-Prot : SWS_FT_FI1

86) chain B
residue 78-84
type prosite
sequence YACRVNH
description IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YACRVNH
source prosite : PS00290

87) chain A
residue 257-263
type prosite
sequence YTCHVQH
description IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YACRVNH
source prosite : PS00290


Display surface

Download
Links